Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1765 ATGCAGGCATTTGCTGGACTCGTAGCTCTCTTACTATCGACTCCATGCTGGTATGTTATGCTCAAACGCATTGAGCAGCGCGTGACTTCAAACTCTGAAAATCTTCTTTCAGAGTTGCAAGCTCAACTTCACCACTCTACCAAACTAAAACGTCCCCTGAATTCTTCGTCGACCAATTTAGCTCGCCTTCTAGATTCGACCTTCAACGAGACTAATGTCTCCTTCTCTTTCATTGAGACCAAAGTGGCTCCAATGCTGTTTCAAGCGTTCCAGACGATTCCTCACTTGACTGAAATCTCATATATTGATATGGAAGGTTTCTTCTTCTCATACTACATCGATCAGGGTCAAACTCTTGCATTGTACTCTAACTCTTCGTTTTCTTCTCCCGCGGGTGCTTCAAAAATTATGTATGTTCAACCTGTAAACCCTAGCACCGGAGACTTTTATGGTGAAGCTAGAATATATGAACACCCTGTTGATGCAAGTTGGATTCAGGAAGCAATCAATAGTTCCTATGGATATGCCTCATTGGGATATGAGTGGAGCAACAATCATCAAATTTTATTTGTTAATTCAGTGAGAATATCAAGAACAGCTGTGATCTCGTTAGGGTTTGCAGCAACTTTAATTGTTGATTTTGTCACTCCTGTTGAGCGTCAAGGTGCAAGCTTATTGTATTTGGCTTCCAAAGATGGGAAAGTGATTCTCCGAGGATTCCAAAGAGCCCATATGGTATTCTCTAATGATACTGCTTCCCTGTATTTAGTGAAATCAAATAATGGCGACCGAATGAGTTATCAAGGCACTGTTTCATGCAAGGATGAAGCCTCTGCTTCAGTTTTGAAAATTGGGGCTACTAAGTACTTGGCAAGCTGCTCATCAATTGATGCCATGGGAGTAGAGTTGGTGTATGTCATAGCTGTACCACAAAATGGATTGGTGGCCTTTGTACACAAGAGTAAAAAACTGGGGTTAGTGCTAATGAGTGCTATGATGGTTACTATATTCATCTCCATCTCCAGTTTTCTATTGTTAAAAGCTATGGTGGGTTGGCGAGAGATGCATTTGTGTTCCTCTCTAATCAAACAAATGGAGGCCACTCAGCAAGCTGAGAGGAAAAGTATGAATAAGAGTCTTGCATTTTCTAGGGCCAGCCATGATATTCGTGCTTCTCTTGCTGGCCTTACCGGTTTGTTAGAGATGTCTTATGAAGAAGTTGTCCCTGATTCAGAACTAGAGACTAATCTGAAGCAAATGGGTGCTTGTATAAAAGACTTGCAAGGGCTATTGAATTCTATTCTTGATACAAGTAAAATTGAGTCAGGGAAAATGCAGCTCGAGGAACATGAATTTGATCTATCCCAGTTCATAGAAGATAAAGTTGACTTGTTCCATCCTCTGGCTTTGAAGAAAGGTGTAGACCTTGTTTTGGACCACTGTGATGGTTCGATTATCAAATATGCGCATGTAAAAGGTGACGAAGGAAAGCTTCAACAAGTTTTGTGCAATTTACTGAGTAATGCTGTTAAATTTACTGATGAGGGACACATAACAGTTCGAGTTTGGGCTCAAAAGCCAAGTTTTCAGAACTCAATAATTTCTTCTCATAGATACAATTTCTTGAAACGCTTGTCATGCTTATTTTGCAAGAAAAATGAAGCAAATATTGATGTAGAAGCCGTGAATACAATCCAACAAGACCCACAGTACTTGGAGTTTGTGTTCGAGGTGGACGATACTGGAAAAGGAATTCCTAAAGAGAAGCAGACATCCGTGTTTGAGAATTATGTTCAAGTCAACGAAACTGCTTTCGGACTAGAGGGCACTGGCTTGGGACTTGGTATTGTGCAATCATTGGTACATTTGATGCATGGAGATATTAGAATTGTGGACAAGGAAATTGGTGAAAAGGGAACGTGCTTTAGATTCAGTGTCCTCCTTGCCCTAAGTGAGACAGTCACAGGTAGCAGTAGCACTAGAGAAGGTAATGATTTAAATCAACCTCAGAGACAAGATATAAATGGCCTTAGTTCTGGTTCTAGCATTCGTTCCCCCAGTCCAAGATTACCTATTTTTGCCTCTAATAGGTCTGGGGCTTCTTGTGTTGTTCTTCTGATTCAAAATGAGGAGCGTCAAAGGACTACCCAAAGGTTCATAGAGGGATTAGGGATTAAAGTTAAGGTTGTGAAGCAATGGGAACATTTATCTCACACTCTCAAGAAGATCAAGCAAAGGGGTTGCAATTCCAGCCAGAGTTCTACAGGAACATCATATATGAGTTCCCAGTCTACGCCTCATAACTCTAATTCCAGAGCTAAAGGGTTTCCTTTGAGTGCTGCAGATGGAATTGACTATATGTCCTCAATTTTTAAGAAGTCAGAAGATGAAGTTTCCTTGGGTTTGGTTCTACTTGTGATTGATGTATTAGCAGGACCCTTTGCAGAACTTTGCATAATGATATCTGAGTTCAGAAGTGGCCTTGGAAATCCTTGTAAGGTTGTTTGGTTAAATAAGTCACTTATTTGTTTGATCCAGATGACATTGTGCTGTCCAAAACCATTTCATGGTACTCGTTTGTTCAACATTATCAAGCTTCTTCCTGAGTTAGGTGGCAATTATACATGCATATCTAGAACTGCAAGAGCAAGGAGAGACATTTTCCATGAAACAATGAGAAAAACATTCAAAGATTACAATGTGTCAAGACATCAATCACCTGTATTCGACAGATCCGAAGTTCCCTCAATTGATGCACCCCCATTTCTAGATGTAGAGCTGCAAAAGTGTGACAGTTCATGGAGAACAGAGCAACTGGATTCTTATGGTAGGTCCAAAGGAAGGAATTCTCAGGTTGATCATGGAGAGATACAAGAATGCAGTGCTTCAGGCAGTGACAAGCCATTGAGTGGCATGAAATTTTTGGTTGTTGATGACACTGAAATTCTGCGTAGGATAGCTTTGAAGACTCTAGAACAATTAGGTGCAACAAGTGTGGAATGTAAGAATGGTGGAGATGCAGTGAACCTCGTTGAAGAGGGTCTAAGGGTGGCTTTTCCCCATCCGCCTTATGATTATATCATAATGGATTGTGAGATGCCGGTAATGGACGGGTTTGAGGCAACAATGCGGATAAGAAAGGTGGAGAGGAATTATGGAGTTTACATCCCCATCATGGCATTAACAGCTCACACCTCCAGGAAGGAGACGAATAAGATCAAAGAGGCAGGAATGGATGCTCATTTAAGCAAGCCACTAAAGAAAGAGCATTTGCTGGATGCAATCAAAAGCATGGACAATAAATAG 3306 0.4093 MQAFAGLVALLLSTPCWYVMLKRIEQRVTSNSENLLSELQAQLHHSTKLKRPLNSSSTNLARLLDSTFNETNVSFSFIETKVAPMLFQAFQTIPHLTEISYIDMEGFFFSYYIDQGQTLALYSNSSFSSPAGASKIMYVQPVNPSTGDFYGEARIYEHPVDASWIQEAINSSYGYASLGYEWSNNHQILFVNSVRISRTAVISLGFAATLIVDFVTPVERQGASLLYLASKDGKVILRGFQRAHMVFSNDTASLYLVKSNNGDRMSYQGTVSCKDEASASVLKIGATKYLASCSSIDAMGVELVYVIAVPQNGLVAFVHKSKKLGLVLMSAMMVTIFISISSFLLLKAMVGWREMHLCSSLIKQMEATQQAERKSMNKSLAFSRASHDIRASLAGLTGLLEMSYEEVVPDSELETNLKQMGACIKDLQGLLNSILDTSKIESGKMQLEEHEFDLSQFIEDKVDLFHPLALKKGVDLVLDHCDGSIIKYAHVKGDEGKLQQVLCNLLSNAVKFTDEGHITVRVWAQKPSFQNSIISSHRYNFLKRLSCLFCKKNEANIDVEAVNTIQQDPQYLEFVFEVDDTGKGIPKEKQTSVFENYVQVNETAFGLEGTGLGLGIVQSLVHLMHGDIRIVDKEIGEKGTCFRFSVLLALSETVTGSSSTREGNDLNQPQRQDINGLSSGSSIRSPSPRLPIFASNRSGASCVVLLIQNEERQRTTQRFIEGLGIKVKVVKQWEHLSHTLKKIKQRGCNSSQSSTGTSYMSSQSTPHNSNSRAKGFPLSAADGIDYMSSIFKKSEDEVSLGLVLLVIDVLAGPFAELCIMISEFRSGLGNPCKVVWLNKSLICLIQMTLCCPKPFHGTRLFNIIKLLPELGGNYTCISRTARARRDIFHETMRKTFKDYNVSRHQSPVFDRSEVPSIDAPPFLDVELQKCDSSWRTEQLDSYGRSKGRNSQVDHGEIQECSASGSDKPLSGMKFLVVDDTEILRRIALKTLEQLGATSVECKNGGDAVNLVEEGLRVAFPHPPYDYIIMDCEMPVMDGFEATMRIRKVERNYGVYIPIMALTAHTSRKETNKIKEAGMDAHLSKPLKKEHLLDAIKSMDNK 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1765 1101 Coils Coil 1100 1101 - -
Prci4g1765 1101 CDD REC_hyHK_CKI1_RcsC-like 974 1095 - -
Prci4g1765 1101 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 365 445 IPR036097 GO:0000155|GO:0007165
Prci4g1765 1101 MobiDBLite consensus disorder prediction 656 692 - -
Prci4g1765 1101 SMART HKATPase_4 493 650 IPR003594 -
Prci4g1765 1101 Gene3D - 950 1101 - -
Prci4g1765 1101 SMART HisKA_10 377 443 IPR003661 GO:0000155|GO:0007165
Prci4g1765 1101 MobiDBLite consensus disorder prediction 941 962 - -
Prci4g1765 1101 Gene3D - 364 444 - -
Prci4g1765 1101 ProSiteProfiles Histidine kinase domain profile. 384 650 IPR005467 -
Prci4g1765 1101 PRINTS Bacterial sensor protein C-terminal signature 608 626 IPR004358 GO:0016310|GO:0016772
Prci4g1765 1101 PRINTS Bacterial sensor protein C-terminal signature 574 588 IPR004358 GO:0016310|GO:0016772
Prci4g1765 1101 PRINTS Bacterial sensor protein C-terminal signature 592 602 IPR004358 GO:0016310|GO:0016772
Prci4g1765 1101 PANTHER TWO-COMPONENT HISTIDINE KINASE 34 1096 - -
Prci4g1765 1101 SMART REC_2 972 1095 IPR001789 GO:0000160
Prci4g1765 1101 MobiDBLite consensus disorder prediction 744 773 - -
Prci4g1765 1101 Pfam Response regulator receiver domain 975 1096 IPR001789 GO:0000160
Prci4g1765 1101 Gene3D - 445 654 IPR036890 -
Prci4g1765 1101 CDD HisKA 378 439 IPR003661 GO:0000155|GO:0007165
Prci4g1765 1101 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 648 IPR003594 -
Prci4g1765 1101 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 432 646 IPR036890 -
Prci4g1765 1101 SUPERFAMILY CheY-like 968 1097 IPR011006 -
Prci4g1765 1101 ProSiteProfiles Response regulatory domain profile. 973 1099 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1765 Prci-Chr4 17733000 17737467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1765 3 1101 Histidine Kinase Gene Family AT2G47430 38.943 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci4g1765 HATPase_c 7.5e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1765 - - pcin:129308889 2147.47