Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1750 ATGGACGGGCACAAGAACAAGACGGAGAAGGGGAAGGAGGAGGTCCGGTACCGGGGAGTCCGGAGGCGGCCATGGGGTAAGTATGCGGCGGAAATAAGGGATCCGTCGAGGCAAGGGGCAAGACAGTGGCTTGGAACGTTTGATACGGCGGAAGAAGCTGCAAGAGCATATGACAAAGCTGCCTTTAACATGAGGGGTCATCTCGCAATCCTTAATTTCCCCAACGAATACTACGCTCATGTACGAGGATCCCCACCATATCCTCCCTATTTAGCTTCTTCTTCTTCTTCGGCTTCTTCGTCATCGTCAGCTTCTTTTCAAGGCCATGGAAGTGGAAGTTCATCGTCTGGTTCGTCACGGAGGCAAGTTTTCGAGTTTGAGTGTTTGGATAATCAGGTTTTGGAAGACCTTCTTGAACCAGAAGAGGAAAAGAAGAAAAGTATTGGAGATTGA 453 0.4967 MDGHKNKTEKGKEEVRYRGVRRRPWGKYAAEIRDPSRQGARQWLGTFDTAEEAARAYDKAAFNMRGHLAILNFPNEYYAHVRGSPPYPPYLASSSSSASSSSSASFQGHGSGSSSSGSSRRQVFEFECLDNQVLEDLLEPEEEKKKSIGD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1750 150 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Prci4g1750 150 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Prci4g1750 150 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Prci4g1750 150 PANTHER DNA-BINDING DOMAIN 7 143 IPR044808 GO:0003700|GO:0009873
Prci4g1750 150 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Prci4g1750 150 FunFam Ethylene-responsive transcription factor 2 15 75 - -
Prci4g1750 150 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Prci4g1750 150 MobiDBLite consensus disorder prediction 89 119 - -
Prci4g1750 150 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Prci4g1750 150 MobiDBLite consensus disorder prediction 88 119 - -
Prci4g1750 150 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Prci4g1750 150 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1750 Prci-Chr4 17419813 17420496 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1750 13 145 AP2-EREBP Transcription Factor Family AT3G23230 63.158 1.96e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g1750 AP2 6.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1750 - - qsu:111996186 184.882