Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1747 ATGGATAAACCCGGCACAGGTAAGGTCGACGCCGAGGGAAGCAGTGGAAGTGGCGGTGGTGTCCGGTACCGGGGAGTGAGGAGGCGGCCATGGGGGAAGTTCGCGGCGGAGATCCGGGACTCTACTAATCAAGGACAGAGGCTGTGGTTAGGGACTTTCGACACGGCGGCGGAAGCAGCCAGGGCGTATGACAGAGCTGCTTATGCCATGAGAGGCTCATTTGCAATCCTCAACTTCCCAAATGAGTACCCTCTCACAGCTGGTCGTTCTAACACTGCAACAACGTCGGCGGCGGCGGCGGCGGCGGAGGCTTCTTCTTCTCACTCGCCGGCTCCTCCTCCTCCTCCTCCTTCAAGGAGCGGCCATGAAGTTTTCGAGTTCGAGTACTTGGACGATAATCTGTTAGAGGAGCTTCTGGATTATGAGGAGAAAAAGAAGGGAAAGTGA 447 0.5705 MDKPGTGKVDAEGSSGSGGGVRYRGVRRRPWGKFAAEIRDSTNQGQRLWLGTFDTAAEAARAYDRAAYAMRGSFAILNFPNEYPLTAGRSNTATTSAAAAAAEASSSHSPAPPPPPPSRSGHEVFEFEYLDDNLLEELLDYEEKKKGK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1747 148 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Prci4g1747 148 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Prci4g1747 148 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Prci4g1747 148 PANTHER DNA-BINDING DOMAIN 22 143 IPR044808 GO:0003700|GO:0009873
Prci4g1747 148 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Prci4g1747 148 Gene3D AP2/ERF domain 21 81 IPR036955 GO:0003700|GO:0006355
Prci4g1747 148 SMART rav1_2 22 86 IPR001471 GO:0003700|GO:0006355
Prci4g1747 148 MobiDBLite consensus disorder prediction 88 103 - -
Prci4g1747 148 ProSiteProfiles AP2/ERF domain profile. 22 80 IPR001471 GO:0003700|GO:0006355
Prci4g1747 148 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Prci4g1747 148 MobiDBLite consensus disorder prediction 88 123 - -
Prci4g1747 148 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1747 Prci-Chr4 17095712 17096480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1747 22 146 AP2-EREBP Transcription Factor Family AT3G23230 60.317 3.19e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci4g1747 AP2 7.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1747 - - pcin:129299756 169.474