Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1732 ATGTCAAGAATAGTCTTGCTTGCAGAAGCTTTATTTGGATTTTTAGATGAACTTCATCGCCAGCCCACGCCATTTTCATTATCTATGGCCTCTCTCCCAGCAGCAGAATCAGTTGTTGACTCTTTTCCTCTGAGGTGTCACAAAATGGTTGACACCGCTGATGGTGGTAGTAATACTGAACAATGTTACATATGCCTGGTGGAGTATGAAGAAGGGGACAAAATTCGTGTTCTGCCTTGCAATCATGAGTTCCACATGGCATGCGTTGACAAGTGGCTTAAGGAGATACATGGTATATGTCCCCTGTGTCGTGGAAATGTCTCTGAAGGGTTCACCGAGTCTTCTGCCTCAGACACACAAACGTCATCTCACTGA 375 0.448 MSRIVLLAEALFGFLDELHRQPTPFSLSMASLPAAESVVDSFPLRCHKMVDTADGGSNTEQCYICLVEYEEGDKIRVLPCNHEFHMACVDKWLKEIHGICPLCRGNVSEGFTESSASDTQTSSH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1732 124 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 110 IPR013083 -
Prci4g1732 124 SMART ring_2 62 103 IPR001841 -
Prci4g1732 124 Pfam Ring finger domain 61 104 IPR001841 -
Prci4g1732 124 FunFam Putative RING zinc finger domain superfamily protein 29 109 - -
Prci4g1732 124 SUPERFAMILY RING/U-box 56 109 - -
Prci4g1732 124 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 2 123 - -
Prci4g1732 124 ProSiteProfiles Zinc finger RING-type profile. 62 104 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1732 Prci-Chr4 16483712 16487297 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1732 1 107 C3H Transcription Factor Family AT5G45290 55.263 4.18e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1732 - - pcin:129309740 260.766