Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1722 ATGGGTGGTGGTAATAGTCGACACGTTTCTCGCCCTTCTACTCGGCGAGTCAACCACACCAACCGCTTCAGTCTTTCCTCTCTTTTTCCCTGCGGTGCCTCCACTTCTCATGCTACTTATGAGATTGAAGATCATCCAACTGAACTTCTAGTAGACTCTACTACAGACTTTAATGATGAAGTTCAGAAAGCCATAGAGGAATCATCTTTATCGCATTCAGCGGAAGCTAGAATTAGCAACTCACATGCTGAAACTGCAACCTCCTTGGGTAGTAGCATTCAATCCTGTGAGAATGCTAATCTTCAAGATTCTTCCAGAAGCGTTGCAACTAGAAATCAGAGGGAGTGCTTGTTTCAAGGAAAGAAGTCGGTTCCTTCTTGTGAGGTAAGTGCTGATAGTAGTCACAATGAACCTTATAGGGGTAGCAACAACACAGCTAGTACTTCATTCGTAGAACAGAAGTCTTCAGACTCAGTCTGTGTAAATAGTTCTGCTAACAAGGATGCAGTCAGTAACATTGATAATTCAGTGGATAGTAGTATCACTCCAATATCTCATGAGACATTGCATCTAAGCAGTTCATCCCCTCAACTGTATGAAAACTCCAGTTCTCGTGAAATTCATGATGAGATTCACAGCGTTACAGCTACAGCTTTCCAGAATTCTGGTTCAAATCCTGATTCTCGAGTTTCCGATATACCAGTAACTTCTCTTTTGCAACAAAATGAATCTCGTGAAGAAGCAATTCCCCCAAGTCTAGGGTTTCTTCTTCCCAACAGGGAAGGAGAACATGTATATGAGAGTGTGCTTCATGTTGATGTGGTTGCTATATCGTCCAATACTTTGTCTCATAGCAATGCTGATTCCATTGATCATAGTACGAGAAGAAATAGTAGGAGACAATTTTGGGATGCCTTTTCACATCGTAGGTCTAGAAGGTTTCGTATTTCTCCAACCATTGTCTTCTCAGCTGGTGATCCTGATGACATAGCATCTCAAGACCAGTGGCTTCTTGATTTGAGCAGTGGGCTCTCAAATGATGAGGTTGGAGAGGATTTTGAATATTTTGGAAGTAGAATCCGCAGATCTAATTCGCGAATGCTGCACTCGAGATCTCAGATCTGGGAAAGACTTCGTGATGGCCTTAATGAAACTGATCAGTGGACTAATTCTTGTCCACTAGGACTTCACCCTGATGGAAGGTGTTCCTGTGAACCTTTCTCCACGACTGAGGAATCTAATACACGAGCAAGTATGTCAAGAATAGTCTTGCTTGCAGAAGCTTTATTTGAGTTTTTAGATGAACTTCATCGCCAGCCCACGCCATTTTCATTATCTATGGCCTCTCTCCCAGCAGCAGAATCAGTTGTTGACTCTTTTCCTCTGAAGTGTCACAAAATGGTTGACACCGCTGATGGTGGTAGTAATACTGAACAATGTTACATATGCCTGGTGGAGTATGAAGAAGGGGACAAAATTCGTGTTCTGCCTTGCAATCATGAGTTCCACATGGCATGCGTTGACAAGTGGCTTAAGGAGATACATGGTATATGTCCCCTGTGTCGTGGAAATGTCTCTGAAGGGTTCACCGAGTCTTCTGCCTCAGACACACAAACGTCATCTCACTGA 1629 0.4303 MGGGNSRHVSRPSTRRVNHTNRFSLSSLFPCGASTSHATYEIEDHPTELLVDSTTDFNDEVQKAIEESSLSHSAEARISNSHAETATSLGSSIQSCENANLQDSSRSVATRNQRECLFQGKKSVPSCEVSADSSHNEPYRGSNNTASTSFVEQKSSDSVCVNSSANKDAVSNIDNSVDSSITPISHETLHLSSSSPQLYENSSSREIHDEIHSVTATAFQNSGSNPDSRVSDIPVTSLLQQNESREEAIPPSLGFLLPNREGEHVYESVLHVDVVAISSNTLSHSNADSIDHSTRRNSRRQFWDAFSHRRSRRFRISPTIVFSAGDPDDIASQDQWLLDLSSGLSNDEVGEDFEYFGSRIRRSNSRMLHSRSQIWERLRDGLNETDQWTNSCPLGLHPDGRCSCEPFSTTEESNTRASMSRIVLLAEALFEFLDELHRQPTPFSLSMASLPAAESVVDSFPLKCHKMVDTADGGSNTEQCYICLVEYEEGDKIRVLPCNHEFHMACVDKWLKEIHGICPLCRGNVSEGFTESSASDTQTSSH 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1722 542 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 444 527 IPR013083 -
Prci4g1722 542 SMART ring_2 480 521 IPR001841 -
Prci4g1722 542 ProSiteProfiles Zinc finger RING-type profile. 480 522 IPR001841 -
Prci4g1722 542 FunFam Putative RING zinc finger domain superfamily protein 447 527 - -
Prci4g1722 542 SUPERFAMILY RING/U-box 474 527 - -
Prci4g1722 542 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 541 - -
Prci4g1722 542 MobiDBLite consensus disorder prediction 126 150 - -
Prci4g1722 542 Pfam Ring finger domain 479 522 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1722 Prci-Chr4 16332013 16340453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1722 391 525 C3H Transcription Factor Family AT5G45290 53.333 3.81e-41 154