Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1704 ATGAGTACTTCAGATGAAGAACGCTCGGTAATAGGAAGCAAGGCGGAAATTGGGTTTCTAGATTTTGCAGAAGAGAGATCTGTCTGTAGTTATGCTCCTAATGAGGAGGACCCCATTGTCATATCTGTCCCATTTCCGTTTGTGAATGACAAACCACAATCAGTATATGTAGGCCATACTGCTGTAGATGTAATAACAATCAAGAACACCACCAATGAACCAGTGGAACTGTGGAGTGTTCATATTTTTGCTTCAAATCCTGAGGACTGTTTCACACTTTCTCTGATGGAACCTCCATCTGCAAATTTAAATGCAGATAGCATTCAAGGTTTTCTAGAGTCTTTCTCTTTGGAGGACAGGATGCTTCAACCTGGTGAGATTTTGAAAGTGTGGTTGTCTTGCAAAACAAAGGAAATGGGATTGCACACGACAATTGTGTATATTGATGCAGGGGATGCAAGAATAGAAAGGACGGTTTTTCTCTTAGCTGAAGACAAAATCTCCCAATCTTTGGCTTCCAAAAAGCCTTATTCAAAAGGAAGAAAGAAAGAAAAATTTGTTGTAAGTGCTTATGTTGCTGGCTCACGTCCTGTGAGGAAGGGAAATCGTGTATACAAGAATAGGCTTCAGACATATGACATTCCCAAGGAAATAAGAGACATGCTGGAGAGCAATCAGATCCCTGATGCCATTGAAAGAGGTCTTACAAGGAAGAATTATGTATCTTATTTCAAAACATTAATTATGATGGAAGAACTACAATTGGAGGAAGACATGAGGACCTATGATATGGAATGTGTAACTTTGAGAAGAAAGGCGCATCAATTCTTGTCACTGGAGGTTCCAGGGCTGGCTGAGAGGAGGCCATCACTGGTTCATGGGGATTATATTTTTGCCAAGCTGGCCTCTGAACATGATAATGATAACGTACCTGTTTACCAGGGTTATGTTCACCGTGTTGAGGCTGATGAAGTATGTTTGAAGTTTGATCCTCAATTTCATTTTTTCCACAAAGATGAAGATCTATACAACGTTCACTTCGCCTATAATAGGCTCAATATGAGACGGTTATATCAGGCAGTTGAGGCTGCAGAAAACCTAGGAAATGAATTCTTATTTCCACATGAGACGCCTAGAAGGAGGCGCATTGAAACCTCTCATTTGGTGCCTATTTCTGGTAATGTTAATGAGGAGCAGATGCTTGCAATCAAGAAGATTCTTGGATGCAAAGGTGCACCTCCTTATCTGATTCATGGTCCTCCTGGTACAGGAAAGACTAGTACCATAGTAGAAGCAGTCCTCCAACTCTACAAAAATTGTAGGAAAGCTCATATTCTCATCTGTGCACCCTCAAATAGTGCTGCAGACTACCTACTTGAGAAACTCCTTGGTCAAAAGGCTGTCGAATTTCGAGAGGAGGAAATATTTAGGCTTAATGCATCTACGAGGCCTTATGAGGAGATGAAACCTGAGCTTTTGCGCTTCTGCTACTTTGATGAGTGTGTGTTCAAATGTCCTCCAGCCAGAGCTATCATGCATTATAAGATCGTAGTATCAACTTATATGAGTGCTTGTCTTCTTTATGCTGAAGGTGTCATCCGAGGCCACTTTTCACACATTTTCTTGGACGAGGCTGGCCAGGCTTCAGAACCAGAAACCATGATCCCAATATCTCATCTCTGCAAAAGGGAGACTGTTGTCGTTGTAGCTGGAGACCCGATGCAGTTGGGTCCGGTAATATATTCCAAGGAAGCAGACAGCAACGGATTGGGGAAATCATACTTGGAAAGATTGTTTGAAAGTGAATTATATTCATATGGAGATAAGAACTATTTAACCAGATTGATTAGAAACTATAGGTGTCACCCGCATATATTACATCTCCCTTCCAAGCTGTTTTACGAAGGAGAATTGATTGCATGTAAGGATGATGCTAATTCTTTGATGCTGAGTGAAAACTTCCTCCCTAATAAAGAGTTCCCTGTTCTCTTCTTCGGCATCCAAGGATGTGATGAAAGAGAAGGGAATAATCCATCATGGTTCAACAGAATTGAAGTGAGTAAGGTCACAGAATTAGTCAAGAGGCTTATGACCGGTGGAAATATGAAGGAGGAAGACATTGGGATTATAACACCGTATAGGCAACAAGTACTCAAAATAAAGCAGACACTTGAAAGTATAGATTTGCCAGAGATTAAGGTTGGAAGTGTTGAGCAGTTTCAGGGACAGGAGAGACGAGTTATTATAATATCGACCGTTCGCTCAACAATCAAACATAATGACTTTGACAGGTTATACTGTTTAGGATTCTTGAGCAATCATCGGAGATTTAATGTTGCAATAACACGTGCCATATCGCTTCTGGTTATTATTGGGAACCCTCACATAATCTCTCGGGATTACTATTGGCACAGACTCTTGTGGCATTGTGTGGAGAATTCATCTTATCTGGGGTGTTCTCTTCCTGAAAGACTGGAGGTTCAGGAGGACTCTGGCTTCAAAAATTTTCAAGAAAACTCATTGCCCTCTGAAGATGTGGCATGGGATCAGGATTCACCTCAATCTGAGTTGCCCAAACCAGCTGGTGCAGATGAAGATGATTGGTCTGATGGTTGGAAGTAG 2622 0.413 MSTSDEERSVIGSKAEIGFLDFAEERSVCSYAPNEEDPIVISVPFPFVNDKPQSVYVGHTAVDVITIKNTTNEPVELWSVHIFASNPEDCFTLSLMEPPSANLNADSIQGFLESFSLEDRMLQPGEILKVWLSCKTKEMGLHTTIVYIDAGDARIERTVFLLAEDKISQSLASKKPYSKGRKKEKFVVSAYVAGSRPVRKGNRVYKNRLQTYDIPKEIRDMLESNQIPDAIERGLTRKNYVSYFKTLIMMEELQLEEDMRTYDMECVTLRRKAHQFLSLEVPGLAERRPSLVHGDYIFAKLASEHDNDNVPVYQGYVHRVEADEVCLKFDPQFHFFHKDEDLYNVHFAYNRLNMRRLYQAVEAAENLGNEFLFPHETPRRRRIETSHLVPISGNVNEEQMLAIKKILGCKGAPPYLIHGPPGTGKTSTIVEAVLQLYKNCRKAHILICAPSNSAADYLLEKLLGQKAVEFREEEIFRLNASTRPYEEMKPELLRFCYFDECVFKCPPARAIMHYKIVVSTYMSACLLYAEGVIRGHFSHIFLDEAGQASEPETMIPISHLCKRETVVVVAGDPMQLGPVIYSKEADSNGLGKSYLERLFESELYSYGDKNYLTRLIRNYRCHPHILHLPSKLFYEGELIACKDDANSLMLSENFLPNKEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVTELVKRLMTGGNMKEEDIGIITPYRQQVLKIKQTLESIDLPEIKVGSVEQFQGQERRVIIISTVRSTIKHNDFDRLYCLGFLSNHRRFNVAITRAISLLVIIGNPHIISRDYYWHRLLWHCVENSSYLGCSLPERLEVQEDSGFKNFQENSLPSEDVAWDQDSPQSELPKPAGADEDDWSDGWK 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1704 873 Gene3D - 620 823 IPR027417 -
Prci4g1704 873 PANTHER CANCER/TESTIS ANTIGEN 55 118 377 - -
Prci4g1704 873 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 806 IPR027417 -
Prci4g1704 873 Pfam AAA domain 514 583 IPR041677 GO:0004386
Prci4g1704 873 Pfam AAA domain 395 488 IPR041677 GO:0004386
Prci4g1704 873 Pfam AAA domain 591 794 IPR041679 -
Prci4g1704 873 FunFam Probable RNA helicase SDE3 506 606 - -
Prci4g1704 873 FunFam Probable RNA helicase SDE3 344 489 - -
Prci4g1704 873 CDD SF1_C_Upf1 621 810 IPR047187 -
Prci4g1704 873 CDD DEXXQc_Helz-like 396 620 IPR026122 GO:0003723|GO:0032574
Prci4g1704 873 Gene3D - 317 606 IPR027417 -
Prci4g1704 873 FunFam Probable RNA helicase SDE3 620 819 - -
Prci4g1704 873 MobiDBLite consensus disorder prediction 838 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1704 Prci-Chr4 16126680 16132896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1704 336 551 Core DNA Replication Machinery Family AT1G08840 30.493 1.89e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1704 K18422 - gmx:100801796 1297.34