Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1678 ATGGCTTCTTCTAACTTCACTACCTTCTTTCTTTTCTTCCTCCTCTTTTACGTTCCTTTCATTTCTCATTCTTCTGCATATCCATCTTCCTCATCGTCATCCTGGGTGAGAGCTGCTTTTTACGATATTAGCAGTGAAATTCCCATTTCAGACGTAAAATCTAAGCTTTTCACTCACCTTCTTTGTGCTTTTGCTCACTTAAGCTCCTCCGATTACAATATTTCAATCAAACCTTCTGACCTGCAAAAGTTCTCCACCTTCACGCACACTGTAAAGCTCCAAAACCCATCTGTTACAACGCTTATATCCATTCGGGGAGGTGGAGAATACTCTTCAATTTTTTCCTCTATCATAAATAGTTCTTCTCATAGAAAATCCTTCATTGATTCATCGATTCGAACCGCTAGGCTATATGGGTTTCAGGGGATAGACCTTTGTGGGGTCGGGCCAAGTGCTGGTTCTGAGTTGAACAATCTAGGAACCCTCTTGGAGGAATGGCGAGAAGCTTTAACTTCTGAGGCAAGAAACTCAAGCAAGCCAGAATTGGTCTTGGTAATGGAAGGTTACTACTTTCCCGCCGGAAAATCCTTGAGTTACCCTTTCGATTCAATGCGGAGGAACTTAGATTGGGTGCAATTTGTAGCCTATGATTACTATCTTCCAACAAAGAACAATTTTACAGGTTTTCATGCTGCCTTATACAGCCCATCTGGGTGGGATAATACTGATACTGGTATCAAAGAGTGGAAGAGCAGGGGATTTTCATCTAGCAAGCTGCTTATTGGCTTGCCTTATCACGGGTATGCATGGATGCTGCAAAATCCAGCAAACAGCACCATGGGAGCGCCAGCATCAGGACCTGGTTTGACAAAAGATGGTTCAGTGGGTTACAAGTTGATAAAAAGCTACATAAAGAGCTTTGGGGAGGCATCTTCTGAACAGTATAATTCTAGTGTTGTGGCTAATCAGTTCCAAGTTGCATCAACTTGGATTAATTTCGACGATGTAGAGGCAATCCGGGCTAAAGTTTCTTATGCCAAGAGAAATGGGCTTCTTGGTTACATTGTTTTCCAAGTGGCTAATGATGATAATTGGATCCTTTCCAAGGCAGCTCTGGACATAGATGAAGATCATCATACAAGGAAGCTGTTAATAATTGTTCTGCCGACAACTCTGACCATCATGCTGATTCTGCTATTGGGAATAATATATTGCTACTATTCTAGAGGAGAATTAGCTTTTGCTACAAAAGTAATATGTAAACTGAAGAGATATTTACGACCAGATGAGAAAAATCTTGAGGAAAGTACTCATGACCTGCTAGTGTTAAAGTATGCTACTGTTAAAATGGCCACACATAACTTTTCAAACGACAATAAGCTTGGAGAGGGTGGATTTGGCACAGTATACAAGGGTAAATTAAGGAAGGGACAGGAAATTGCAGTAAAACGGCTCTCTAAAACTTCAAGGCAAGGCCTTGAAGAGTTCACAAATGAGGTCTCACTTACAGCAAAACTACAACACGTCAATTTAGTTAGACTTCTGGGATACTGCTCTGAAAGAGATGAGAAAATACTGATCTATGAATACCTCCCAAACAGAAGCTTGGATCATTTCCTCTTCGATCCAAGGAGATCAATTCTTTTGGACTGGAGAAGACGTGTCAACATCATTGAAGGGGTTACTCAAGGTCTTCTTTATCTCCAAGAGTACTCAAACTTCACTATAATCCACCGAGATTTGAAAGCTAGTAATGTGTTGTTGGATCATGAAATGAATCCAAAAATATCTGATTTTGGGATGGCTAGAATGTTCAAGAAAGACGAACTTGAAGCAAACACTGGAAGGATTGTTGGCACATAG 1863 0.4069 MASSNFTTFFLFFLLFYVPFISHSSAYPSSSSSSWVRAAFYDISSEIPISDVKSKLFTHLLCAFAHLSSSDYNISIKPSDLQKFSTFTHTVKLQNPSVTTLISIRGGGEYSSIFSSIINSSSHRKSFIDSSIRTARLYGFQGIDLCGVGPSAGSELNNLGTLLEEWREALTSEARNSSKPELVLVMEGYYFPAGKSLSYPFDSMRRNLDWVQFVAYDYYLPTKNNFTGFHAALYSPSGWDNTDTGIKEWKSRGFSSSKLLIGLPYHGYAWMLQNPANSTMGAPASGPGLTKDGSVGYKLIKSYIKSFGEASSEQYNSSVVANQFQVASTWINFDDVEAIRAKVSYAKRNGLLGYIVFQVANDDNWILSKAALDIDEDHHTRKLLIIVLPTTLTIMLILLLGIIYCYYSRGELAFATKVICKLKRYLRPDEKNLEESTHDLLVLKYATVKMATHNFSNDNKLGEGGFGTVYKGKLRKGQEIAVKRLSKTSRQGLEEFTNEVSLTAKLQHVNLVRLLGYCSERDEKILIYEYLPNRSLDHFLFDPRRSILLDWRRRVNIIEGVTQGLLYLQEYSNFTIIHRDLKASNVLLDHEMNPKISDFGMARMFKKDELEANTGRIVGT 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1678 620 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 35 378 IPR001223 GO:0005975
Prci4g1678 620 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 531 620 - -
Prci4g1678 620 ProSitePatterns Protein kinases ATP-binding region signature. 461 483 IPR017441 GO:0005524
Prci4g1678 620 Gene3D Phosphorylase Kinase; domain 1 417 530 - -
Prci4g1678 620 SUPERFAMILY Protein kinase-like (PK-like) 436 620 IPR011009 -
Prci4g1678 620 Gene3D Transferase(Phosphotransferase) domain 1 531 620 - -
Prci4g1678 620 ProSiteProfiles Protein kinase domain profile. 455 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1678 620 Pfam Glycosyl hydrolases family 18 43 362 IPR001223 GO:0005975
Prci4g1678 620 Gene3D - 265 333 IPR029070 -
Prci4g1678 620 SUPERFAMILY (Trans)glycosidases 45 375 IPR017853 -
Prci4g1678 620 Gene3D Glycosidases 50 364 - -
Prci4g1678 620 SMART serkin_6 455 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1678 620 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 421 530 - -
Prci4g1678 620 Pfam Protein tyrosine and serine/threonine kinase 458 611 IPR001245 GO:0004672|GO:0006468
Prci4g1678 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Prci4g1678 620 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 103 620 - -
Prci4g1678 620 SMART 2g34 35 362 IPR011583 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1678 Prci-Chr4 15669341 15673361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1678 36 371 Glycoside Hydrolase AT4G19810 43.620 1.34e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci4g1678 Glyco_hydro_18 1.1e-49 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1678 - - aprc:113847882 805.053