LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci4g1673	ATGAAAGCCATACAAAGCATTCCATGCATGTTGTCAAGAACTGCATTTGTTATCGTCCTTGTTTCTCTTTATCTTCCATTCCGATGGGCAGAAGGACAACCTGCACAGGTCAGTGCTGGTTATTATTTTCCGGGAATCCCCATTTCCCAAGTCGACTCCACATTGTTTAGTCACCTCATATTTTATTGTGCTTATTTGAACACTTCGTCCTTTGAGATCTTAATCCGCCCAGTAGATGAGCCCGAAGTTCGTAGCTTCTCCAGCACAGTCAGAAAAGAGAACCCATCCGTCAAAACACTTCTCTCTATTTGGGGGAAAGAGAGAGATTCGTATGCTTCAATGGTGAGCAATTATTCTTCAAGAGGATCCTTCATTGAATCCTCTATAAACGTAGCCAGGGAATACCAGTTCGATGGCCTCGACCTTTACTGGGATTACCCTCAAACAAAATCTGACATGAATGGTATGGCAAATCTTGTAAAAGAATGGAGTCTATACATAGATGATAATGATCCACAACTGATACTGACTGCCACTGTTCCATATACTCCATATTGGCCATTCAATATCTCTGTTTATCCTGTTGAGTCAATGGCAACATACTTAGACTGGATACATGTTAAAACATATTCTTACATTCATTGGACGCCGAATGTCACTGCCGCACATTCAGCTTTATATGATCCTTCAAGTAGATATAATAGCACAGACTATGGTATCAATGAATGGATTGCCAGGGGATTGTCACCCAACAAGTTGGTTTTGGGGTTGGCTTATTTTGGGTATGCATGGAATCTTACTGATCCTAACAACAATGCAATAGGTGCGCCGGCAACAGGTCCATCACAAACTCAACATGGATTATGGCTAATCACATACAAGGAAATCAAAGACCAAATTCAGTCCTGCGGAGGAAGCAATGTACAATACAATGACACTTATGTAATCAACTACTGGTCATGTGGATCAACTTGGATAGGTTTTGATGATGTTGAGGCTATCAAAATTAAGGTGTCTTATGCCAAGGAAAAGAAGTTGCTCGGTTACGCCGCATGGCAGGTTTCTGACGATGACAATTGGTTGCTTTCTCGTGCAGCAAATATAGAAGCAGCAGAACATTTGAATGGTAACGGTACAGATGTCAAAGTCTTTTCTTTCTCTGACATTGAAAGGGCCACAAATAGATTCTCACTTGAAAATAAGATTGGAGAAGGTGGTTTTGGAGTTGTTTACAAGGGAATATTACCTGATGGAGAGGAAATAGCAGTGAAAAGACGATCAAAAGGTTCTAAGCAAGGATTTGAGGAATTCAAAAATGAGACAACACTTAATGCAAGACTGCAACATGTCAATCTTCTTCGAGTATTGGGGTTCTGCAATGACAAGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGCCTTCAGTTCCATCTTTTTGACCCTACAAAGCAGCATCTACTAGACTGGAGACAACGTGTTTGTATCATTGAAGGAGTAACTCAAGGGCTAATCTATCTTCAAGAATATTCTAGACTGACAGTAATTCATAGAGACCTGAAAGCTAGCAATATTTTATTGGATCATGAGATGAAGCCAAAGATTTCAGAATTTGGCATGGCAAGACCATTTAAAAAAGATGAACATGAAGAAAACGCCAGTAAACTTGTAGGGACATACGGCTACATACCTCCTGAATATGTTGAGAAAGGGTTGTGCTCCATTAAATCTGATGTTTATAGCTTTGGTGTCCTCCTCCTACAAATTATTAGTGGAAAAAGGATCTCAAGCTTATATGGAGTGAGTAATGATTTGAACCTCTTAGAATATGCTTACATGTTATGGAAAGAAGGAAAAGGCATGGAATTCGTGGATTATTCACTTGATGATACATCTTCTTCTTGCAAATTGATGAGATGCTTGCAAATTGCTCTCCTGTGTGTCCAGAAATATGCAGAAGATAGGCCTAGCATGCTAGAAGTTTATTTAATGCTAAGAAACGAAAGCAACTTCATAGCAAGCCCAAAACAGCCTGCATATTCAAACGTAGGGAATGAAGAGGCGTTGAAGTTTATTCAACGGCCAGAAATTTGTTCACGAAATGAAACAACAATGTCTCCAGTTTGGGGTCGATAG	2142	0.3973	MKAIQSIPCMLSRTAFVIVLVSLYLPFRWAEGQPAQVSAGYYFPGIPISQVDSTLFSHLIFYCAYLNTSSFEILIRPVDEPEVRSFSSTVRKENPSVKTLLSIWGKERDSYASMVSNYSSRGSFIESSINVAREYQFDGLDLYWDYPQTKSDMNGMANLVKEWSLYIDDNDPQLILTATVPYTPYWPFNISVYPVESMATYLDWIHVKTYSYIHWTPNVTAAHSALYDPSSRYNSTDYGINEWIARGLSPNKLVLGLAYFGYAWNLTDPNNNAIGAPATGPSQTQHGLWLITYKEIKDQIQSCGGSNVQYNDTYVINYWSCGSTWIGFDDVEAIKIKVSYAKEKKLLGYAAWQVSDDDNWLLSRAANIEAAEHLNGNGTDVKVFSFSDIERATNRFSLENKIGEGGFGVVYKGILPDGEEIAVKRRSKGSKQGFEEFKNETTLNARLQHVNLLRVLGFCNDKEEQMLVYEYMPNKSLQFHLFDPTKQHLLDWRQRVCIIEGVTQGLIYLQEYSRLTVIHRDLKASNILLDHEMKPKISEFGMARPFKKDEHEENASKLVGTYGYIPPEYVEKGLCSIKSDVYSFGVLLLQIISGKRISSLYGVSNDLNLLEYAYMLWKEGKGMEFVDYSLDDTSSSCKLMRCLQIALLCVQKYAEDRPSMLEVYLMLRNESNFIASPKQPAYSNVGNEEALKFIQRPEICSRNETTMSPVWGR	713

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci4g1673	713	SMART	2g34	36	357	IPR011583	GO:0008061
	Prci4g1673	713	Gene3D	Glycosidases	49	359	-	-
	Prci4g1673	713	ProSitePatterns	Protein kinases ATP-binding region signature.	402	424	IPR017441	GO:0005524
	Prci4g1673	713	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	472	675	-	-
	Prci4g1673	713	SUPERFAMILY	Chitinase insertion domain	260	328	IPR029070	-
	Prci4g1673	713	Gene3D	Phosphorylase Kinase; domain 1	360	471	-	-
	Prci4g1673	713	Pfam	Protein tyrosine and serine/threonine kinase	397	663	IPR001245	GO:0004672\|GO:0006468
	Prci4g1673	713	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	517	529	IPR008271	GO:0004672\|GO:0006468
	Prci4g1673	713	Gene3D	Transferase(Phosphotransferase) domain 1	472	681	-	-
	Prci4g1673	713	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	372	707	-	-
	Prci4g1673	713	Pfam	Glycosyl hydrolases family 18	42	357	IPR001223	GO:0005975
	Prci4g1673	713	SMART	serkin_6	396	674	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci4g1673	713	SUPERFAMILY	Protein kinase-like (PK-like)	379	682	IPR011009	-
	Prci4g1673	713	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	36	373	IPR001223	GO:0005975
	Prci4g1673	713	FunFam	Uncharacterized protein	371	471	-	-
	Prci4g1673	713	FunFam	Class V chitinase CHIT5b	259	328	-	-
	Prci4g1673	713	SUPERFAMILY	(Trans)glycosidases	39	364	IPR017853	-
	Prci4g1673	713	Gene3D	-	259	328	IPR029070	-
	Prci4g1673	713	ProSiteProfiles	Protein kinase domain profile.	396	674	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci4g1673	Prci-Chr4	15514045	15518016	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci4g1673	384	682	Receptor kinase-like Gene Family	AT4G11480	52.000	5.65e-107	338

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci4g1673		Glyco_hydro_18	7.3e-58	CL0058

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci4g1673	-		-	pcin:129308877	1460.66