Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1671 ATGAGCAAAGAGTTGAAAGATGGTCAGCTGAAGCCAAAAGTTTCATCCAAGAGCAGGTTTCATTTTGAGACCTTCATCCACCCAGAAGATGAGCCTGACGTTCGTAGCTTCTCCAGCAAAGTCAGAGAAAAGAACCGATCCATCAAAACACTCGTCTATATTTGGGGAAATAATATTTATGCCTCGATGGTGAGCAATCAATCTTCAAGGAGATCCTTCATTGCATCTTCCGTAGGCATAGCCAAGGCATACGAGTTTGATGGCCTTGACCTTTACTGCGATTACCCTGAAATAAAAGCTGACATGGATGGTATGGCAATTCTTTTACAAGAATGGAGACAATATGTACATGATAATGATCCAGAACTGATCTTGACTGCTACAATTCCATATTCGCCATATTGGCCATTCAACAAGTCTATTTATCCTGTTGAGTCAATGGCAAGGTACTTGGACCGGGTACATGTCAAAACATATTCTTACATTCTGGGGAGGTCACATGTCACTGCCGCACATTCAGCTTTATTTGACCCGTCAAGTAGATATTACAGCACAGACTATGGTATCAACGAATGGATTTCCAGGGGATTGTCACCCAACAAGTTGGTTTTGGGGTTGGCTTATTTTGGGTATGCATGGAATCTCACTGATCCTAATGACAATGCAATAGGTGCGCCAGCAACAGGTCAAGCACAAGCTCAACGTGGATCGGGGAAAATGACATACGGGGAGATCAACGACCGAATTCTCTCCCGCAGAGAAGGCGATATACAATATAATGACACTTATGTAATCAACTACTGGTCATGTGGATCAACTTGGATAGGTTTTGATGATGTTGAGGCTATCAAAATTAAGGTGTCTAATGCGAAGGAAAAGAAGTTGCTCGGTTACGCTTCATGGCAGGTTTCTGACAATGACAATTGGTTGCTTTCCTATGCAGCTAAAGGGGAAGATAATAAAGTTAAAGGGGAACATTACTGTTCACGTTTGCTAAAGATTCTCTTGGCTCCAGCTGTGTTGTCTGTCTTGCTATTAGTATTAGGTTTCTTAGTCTACAGCCAAAAGAGAAGGTTCAAATTAAAAGAAAATAAAGAAGCAGCAGAACATTTGAATGGTAATGCTACAGATGTCAAAGTCATTTCTTTCTCTGACATTTTAAGGGCCACAAATGGATTCTCAATTGAAAATAAGATTGGAGAAGGTGGTTTTGGAGTTGTTTACAAGGGAATATTACCTGATGGTGAGGAAATAGCAGTCAAAAGACGATCCAAAGGTTCTAAGCAAGGATTCGAGGAATTCAAAAATGAGACAACACTTAACGCAAGACTACAGCATGTCAATCTCGTTCGACTATTGGGATTCTGCAATGACAGGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGCCTTCACTTCTATCTTTTTGGGTAA 1443 0.4075 MSKELKDGQLKPKVSSKSRFHFETFIHPEDEPDVRSFSSKVREKNRSIKTLVYIWGNNIYASMVSNQSSRRSFIASSVGIAKAYEFDGLDLYCDYPEIKADMDGMAILLQEWRQYVHDNDPELILTATIPYSPYWPFNKSIYPVESMARYLDRVHVKTYSYILGRSHVTAAHSALFDPSSRYYSTDYGINEWISRGLSPNKLVLGLAYFGYAWNLTDPNDNAIGAPATGQAQAQRGSGKMTYGEINDRILSRREGDIQYNDTYVINYWSCGSTWIGFDDVEAIKIKVSNAKEKKLLGYASWQVSDNDNWLLSYAAKGEDNKVKGEHYCSRLLKILLAPAVLSVLLLVLGFLVYSQKRRFKLKENKEAAEHLNGNATDVKVISFSDILRATNGFSIENKIGEGGFGVVYKGILPDGEEIAVKRRSKGSKQGFEEFKNETTLNARLQHVNLVRLLGFCNDREEQMLVYEYMPNKSLHFYLFG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1671 480 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Prci4g1671 480 Pfam Glycosyl hydrolases family 18 34 304 IPR001223 GO:0005975
Prci4g1671 480 SMART 2g34 7 306 IPR011583 GO:0008061
Prci4g1671 480 SUPERFAMILY Chitinase insertion domain 209 277 IPR029070 -
Prci4g1671 480 Gene3D Phosphorylase Kinase; domain 1 353 468 - -
Prci4g1671 480 Pfam Protein kinase domain 394 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1671 480 FunFam Class V chitinase CHIT5b 208 277 - -
Prci4g1671 480 ProSiteProfiles Protein kinase domain profile. 393 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1671 480 Gene3D - 208 277 IPR029070 -
Prci4g1671 480 SUPERFAMILY Protein kinase-like (PK-like) 378 479 IPR011009 -
Prci4g1671 480 Gene3D Glycosidases 22 307 - -
Prci4g1671 480 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 322 IPR001223 GO:0005975
Prci4g1671 480 SUPERFAMILY (Trans)glycosidases 33 311 IPR017853 -
Prci4g1671 480 FunFam Uncharacterized protein 368 468 - -
Prci4g1671 480 PANTHER CHITINASE 23 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1671 Prci-Chr4 15482213 15500169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1671 26 316 Glycoside Hydrolase AT4G19810 40.864 1.50e-59 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci4g1671 Glyco_hydro_18 8.9e-49 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1671 - - pcin:129308681 954.51