Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1670 ATGGTGAGCAATCAATCTTCAAGGAGATCCTTCATTGCATCTTCCGTAGGCATAGCCAAGGCATACGAGTTTGATGGCCTTGACCTTTACTGCGATTACCCTGAAATAAAAGCTGACATGGATGGTATGGCAATTCTTTTACAAGAATGGAGACAATATGTACATGATAATGATCCAGAACTGATCTTGACTGCTACAATTCCATATTCGCCATATTGGCCATTCAACAAGTCTATTTATCCTGTTGAGTCAATGGCAAGGTACTTGGACCGGGTACATGTCAAAACATATTCTTACATTCTGGGGAGGTCACATGTCACTGCCGCACATTCAGCTTTATTTGACCCGTCAAGTAGATATTACAGCACAGACTATGGTATCAACGAATGGATTTCCAGGGGATTGTCACCCAACAAGTTGGTTTTGGGGTTGGCTTATTTTGGGTATGCATGGAATCTCACTGATCCTAATGACAATGCAATAGGTGCGCCAGCAACAGGTCAAGCACAAGCTCAACGTGGATCGGGGAAAATGACATACGGGGAGATCAACGACCGAATTCTCTCCCGCAGAGAAGGCGATATACAATATAATGACACTTATGTAATCAACTACTGGTCATGTGGATCAACTTGGATAGGTTTTGATGATGTTGAGGCTATCAAAATTAAGGTGTCTAATGCGAAGGAAAAGAAGTTGCTCGGTTACGCTTCATGGCAGGTTTCTGACAATGACAATTGGTTGCTTTCCTATGCAGCTAAAGGGGAAGATAATAAAGTTAAAGGGGAACATTACTGTTCACGTTTGCTAAAGATTCTCTTGGCTCCAGCTGTGTTGTCTGTCTTGCTATTAGTATTAGGTTTCTTAGTCTACAGCCAAAAGAGAAGGTTCAAATTAAAAGAAAATAAAGAAGCAGCAGAACATTTGAATGGTAATGCTACAGATGTCAAAGTCATTTCTTTCTCTGACATTTTAAGGGCCACAAATGGATTCTCAATTGAAAATAAGATTGGAGAAGGTGGTTTTGGAGTTGTTTACAAGGGAATATTACCTGATGGTGAGGAAATAGCAGTCAAAAGACGATCCAAAGGTTCTAAGCAAGGATTCGAGGAATTCAAAAATGAGACAACACTTAACGCAAGACTACAGCATGTCAATCTCGTTCGACTATTGGGATTCTGCAATGACAGGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGCCTTCACTTCTATCTTTTTGACCCTACAAAGCAACATCTACTAGATTGGAGACAACGTGTTGGTATCATTGAAAGAGTTACTCAAGGACTTATCTATCTTCAAGAATATTCTAGGCTGACAATAATTCATAGAGACTTGAAAGTTAGCAATATTCTGTTGGATCATGAGATGAAGCCAAGGATTTCAGACTTTGGCATGGCAAGACCCTTTAAAAAAGATGTACATGAAGAAAATGCCAGCAAACTTGTTGGGACATAG 1491 0.3997 MVSNQSSRRSFIASSVGIAKAYEFDGLDLYCDYPEIKADMDGMAILLQEWRQYVHDNDPELILTATIPYSPYWPFNKSIYPVESMARYLDRVHVKTYSYILGRSHVTAAHSALFDPSSRYYSTDYGINEWISRGLSPNKLVLGLAYFGYAWNLTDPNDNAIGAPATGQAQAQRGSGKMTYGEINDRILSRREGDIQYNDTYVINYWSCGSTWIGFDDVEAIKIKVSNAKEKKLLGYASWQVSDNDNWLLSYAAKGEDNKVKGEHYCSRLLKILLAPAVLSVLLLVLGFLVYSQKRRFKLKENKEAAEHLNGNATDVKVISFSDILRATNGFSIENKIGEGGFGVVYKGILPDGEEIAVKRRSKGSKQGFEEFKNETTLNARLQHVNLVRLLGFCNDREEQMLVYEYMPNKSLHFYLFDPTKQHLLDWRQRVGIIERVTQGLIYLQEYSRLTIIHRDLKVSNILLDHEMKPRISDFGMARPFKKDVHEENASKLVGT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1670 496 SUPERFAMILY Protein kinase-like (PK-like) 315 494 IPR011009 -
Prci4g1670 496 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 260 IPR001223 GO:0005975
Prci4g1670 496 SMART 2g34 1 244 IPR011583 GO:0008061
Prci4g1670 496 Gene3D - 146 215 IPR029070 -
Prci4g1670 496 FunFam Os07g0541700 protein 407 496 - -
Prci4g1670 496 FunFam Uncharacterized protein 306 406 - -
Prci4g1670 496 Pfam Protein kinase domain 332 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1670 496 SUPERFAMILY Chitinase insertion domain 147 215 IPR029070 -
Prci4g1670 496 ProSiteProfiles Protein kinase domain profile. 331 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1670 496 SMART serkin_6 331 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1670 496 Gene3D Transferase(Phosphotransferase) domain 1 407 496 - -
Prci4g1670 496 Gene3D Glycosidases 1 245 - -
Prci4g1670 496 Gene3D Phosphorylase Kinase; domain 1 291 406 - -
Prci4g1670 496 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 247 496 - -
Prci4g1670 496 Pfam Glycosyl hydrolases family 18 1 242 IPR001223 GO:0005975
Prci4g1670 496 SUPERFAMILY (Trans)glycosidases 1 249 IPR017853 -
Prci4g1670 496 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Prci4g1670 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Prci4g1670 496 FunFam Class V chitinase CHIT5b 146 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1670 Prci-Chr4 15482213 15501059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1670 270 496 Receptor kinase-like Gene Family AT4G04500 50.870 8.33e-69 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci4g1670 Glyco_hydro_18 5.8e-43 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1670 - - pcin:129308681 988.023