Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1666 ATGAGCAAAGAGTTGAAAGATGGTCAGCTGAAGCCAAAAGTTTCATCCAAGAGCAGGTTTCATTTTGAGACCTTCATCCACCCAGAAGATGAGCCTGACGTTCGTAGCTTCTCCAGCAAAGTCAGAGAAAAGAACCGATCCATCAAAACACTCGTCTATATTTGGGGAAATAATATTTATGCCTCGATGGTGAGCAATCAATCTTCAAGGAGATCCTTCATTGCATCTTCCGTAGGCATAGCCAAGGCATACGAGTTTGATGGCCTTGACCTTTACTGCGATTACCCTGAAATAAAAGCTGACATGGATGGTATGGCAATTCTTTTACAAGAATGGAGACAATATGTACATGATAATGATCCAGAACTGATCTTGACTGCTACAATTCCATATTCGCCATATTGGCCATTCAACAAGTCTATTTATCCTGTTGAGTCAATGGCAAGGTACTTGGACCGGGTACATGTCAAAACATATTCTTACATTCTGGGGAGGTCACATGTCACTGCCGCACATTCAGCTTTATTTGACCCGTCAAGTAGATATTACAGCACAGACTATGGTATCAACGAATGGATTTCCAGGGGATTGTCACCCAACAAGTTGGTTTTGGGGTTGGCTTATTTTGGGTATGCATGGAATCTCACTGATCCTAATGACAATGCAATAGGTGCGCCAGCAACAGGTCAAGCACAAGCTCAACGTGGATCGGGGAAAATGACATACGGGGAGATCAACGACCGAATTCTCTCCCGCAGAGAAGGCGATATACAATATAATGACACTTATGTAATCAACTACTGGTCATGTGGATCAACTTGGATAGGTTTTGATGATGTTGAGGCTATCAAAATTAAGGTGTCTAATGCGAAGGAAAAGAAGTTGCTCGGTTACGCTTCATGGCAGGTTTCTGACAATGACAATTGGTTGCTTTCCTATGCAGCTAAAGGGGAAGATAATAAAGTTAAAGGGGAACATTACTGTTCACGTTTGCTAAAGATTCTCTTGGCTCCAGCTGTGTTGTCTGTCTTGCTATTAGTATTAGGTTTCTTAGTCTACAGCCAAAAGAGAAGGTTCAAATTAAAAGAAAATAAAGAAGCAGCAGAACATTTGAATGGTAATGCTACAGATGTCAAAGTCATTTCTTTCTCTGACATTTTAAGGGCCACAAATGGATTCTCAATTGAAAATAAGATTGGAGAAGGTGGTTTTGGAGTTGTTTACAAGGGAATATTACCTGATGGTGAGGAAATAGCAGTCAAAAGACGATCCAAAGGTTCTAAGCAAGGATTCGAGGAATTCAAAAATGAGACAACACTTAACGCAAGACTACAGCATGTCAATCTCGTTCGACTATTGGGATTCTGCAATGACAGGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGCCTTCACTTCTATCTTTTTGACCCTACAAAGCAACATCTACTAGATTGGAGACAACGTGTTGGTATCATTGAAAGAGTTACTCAAGGACTTATCTATCTTCAAGAATATTCTAGGCTGACAATAATTCATAGAGACTTGAAAGTTAGCAATATTCTGTTGGATCATGAGATGAAGCCAAGGATTTCAGACTTTGGCATGGCAAGACCCTTTAAAAAAGATGTACATGAAGAAAATGCCAGCAAACTTGTTGGGACATAG 1677 0.4025 MSKELKDGQLKPKVSSKSRFHFETFIHPEDEPDVRSFSSKVREKNRSIKTLVYIWGNNIYASMVSNQSSRRSFIASSVGIAKAYEFDGLDLYCDYPEIKADMDGMAILLQEWRQYVHDNDPELILTATIPYSPYWPFNKSIYPVESMARYLDRVHVKTYSYILGRSHVTAAHSALFDPSSRYYSTDYGINEWISRGLSPNKLVLGLAYFGYAWNLTDPNDNAIGAPATGQAQAQRGSGKMTYGEINDRILSRREGDIQYNDTYVINYWSCGSTWIGFDDVEAIKIKVSNAKEKKLLGYASWQVSDNDNWLLSYAAKGEDNKVKGEHYCSRLLKILLAPAVLSVLLLVLGFLVYSQKRRFKLKENKEAAEHLNGNATDVKVISFSDILRATNGFSIENKIGEGGFGVVYKGILPDGEEIAVKRRSKGSKQGFEEFKNETTLNARLQHVNLVRLLGFCNDREEQMLVYEYMPNKSLHFYLFDPTKQHLLDWRQRVGIIERVTQGLIYLQEYSRLTIIHRDLKVSNILLDHEMKPRISDFGMARPFKKDVHEENASKLVGT 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1666 558 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Prci4g1666 558 SMART 2g34 7 306 IPR011583 GO:0008061
Prci4g1666 558 Gene3D Glycosidases 23 307 - -
Prci4g1666 558 SUPERFAMILY Protein kinase-like (PK-like) 377 556 IPR011009 -
Prci4g1666 558 Gene3D Transferase(Phosphotransferase) domain 1 469 558 - -
Prci4g1666 558 FunFam Class V chitinase CHIT5b 208 277 - -
Prci4g1666 558 Pfam Protein kinase domain 394 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1666 558 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 309 558 - -
Prci4g1666 558 SMART serkin_6 393 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1666 558 ProSiteProfiles Protein kinase domain profile. 393 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1666 558 FunFam Uncharacterized protein 368 468 - -
Prci4g1666 558 SUPERFAMILY (Trans)glycosidases 33 311 IPR017853 -
Prci4g1666 558 Pfam Glycosyl hydrolases family 18 34 304 IPR001223 GO:0005975
Prci4g1666 558 FunFam Os07g0541700 protein 469 558 - -
Prci4g1666 558 Gene3D Phosphorylase Kinase; domain 1 353 468 - -
Prci4g1666 558 Gene3D - 208 277 IPR029070 -
Prci4g1666 558 SUPERFAMILY Chitinase insertion domain 209 277 IPR029070 -
Prci4g1666 558 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 322 IPR001223 GO:0005975
Prci4g1666 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1666 Prci-Chr4 15482213 15501062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1666 332 558 Receptor kinase-like Gene Family AT4G04500 50.870 2.75e-68 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci4g1666 Glyco_hydro_18 1.4e-48 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1666 - - pcin:129308681 1112.44