Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1656 ATGTCAGGAGAGGAAGAAGTAGCAGTTCCTGCTGAGGCTTCAGCACCCTTGGGTGAGAGCATGGACATCATGACTGCCTTGCAGCTTGTGCTAAGGAAGTCACTTGCTCATGGGGGACTCGCACGAGGACTCCATGAAGGTGCCAAGGTGATAGAAAAGCATGCTGCACATCTCTGCGTGCTTGCTGAGGACTGTGATCAGCCAGATTATGTTAAATTGGTCAAGGCACTTTGTGCTGATCATAATGTGAAATTGATGACAGTTGCTAGTGCTAAAACTCTCGGCGAATGGGCTGGTTTGTGCAAGATTGATTCTGAGGGCAAGGCAAGGAAGGTGGTTGGCTGCTCCTGTGTTGTTGTGAAGGATTTTGGAGAGGAGTCGCCAGCATTAGATATTGTTCAGCAGTACATAAAGGCTCAATAA 423 0.4823 MSGEEEVAVPAEASAPLGESMDIMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNVKLMTVASAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESPALDIVQQYIKAQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1656 140 PANTHER 40S RIBOSOMAL PROTEIN S12 10 139 - -
Prci4g1656 140 PRINTS Ribosomal protein S12E family signature 30 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci4g1656 140 PRINTS Ribosomal protein S12E family signature 110 123 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci4g1656 140 PRINTS Ribosomal protein S12E family signature 44 60 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci4g1656 140 PRINTS Ribosomal protein S12E family signature 85 106 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci4g1656 140 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 26 119 IPR004038 -
Prci4g1656 140 ProSitePatterns Ribosomal protein S12e signature. 26 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci4g1656 140 SUPERFAMILY L30e-like 18 139 IPR029064 -
Prci4g1656 140 Gene3D - 4 140 IPR029064 -
Prci4g1656 140 FunFam 40S ribosomal protein S12 7 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1656 Prci-Chr4 15213985 15216344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1656 19 140 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.951 4.77e-65 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1656 K02951 - qsa:O6P43_003001 234.572