Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1622 ATGGATCTTAATATCTGGTCAACTAAAGGGGAAGATAGGCCAAGGAAAAAAGACAGGCTGAAGATTATTTTGACTGTAGTGGCTGCATCTGTTCTGCTTTGTAGTGCCATAATCGTCATCCTGTGGAGAAGAATGTTCAAACCAAAGGGGAGGAGAAAAGCTGTAACAGATTCTGCAGAAAATTTTCCAGACAACACTGTTCATTTGAAAGTCTTTTCATTTTCTGACATTGAAGAGGCCACAGATAGATTCTCAGACACAAATATGATAGGAAAAGGTGGTTATGGTACTGTTTACGAGGGCATACTACAAGATGGTCAAAAAATAGCAGTGAAAAAACGATCACAAGGTTCAGCACAAGGATTTGAGGAATTCAAAAATGAGGTAACAGTTACTGCAAGACTACAACATGTAAATCTTGTTCAGTTGCTGGGTTTCTGCACTCATAGAGAAGAGCAAATGCTGGTTTATGAATACATGCCAAACAAAAGCCTTGACTCCTATCTCTTTGATCCTACAAGACGATGTTTGCTTGATTGGAGGAACCGAGTTGACATTATTGAAGGAATTGTTCAAGGGCTTCTTTACTTGCAAGAATACTCAAGAGTGAGGATAATTCATAGAGATATAAAAGCTAGTAATATTTTGTTGAATGATAAATTGAAACCAAAAATTTCAGATTTTGGCATGGCAAGAATATTTGCAAAAGATGAACTTGAAGCAAACAGTTGCAAGATAGTTGGAACTTATGGTTATGTTCCTCCTGAATACGTGAAAAGTGGCATATACTCCACTAAGTCAGATGTGTACAGTTTTGGAGTTCTAATTCTTCAAATTATAAGTGGAATGAGGACAACAAGACTTTATGGTGAACATGAAAATTTATACCTTGCAGGATATGCTTATGAATTATGGAAAGAAGGGAAAGGAATGGAGTTTATGGATACTTCCTTGGATGACACATCTTCACCATGTAAATTGTTACGGTGCATGAATATTGCTCTGTTATGTGTGCAAGAAAATGCAAATGATCGGCCGTCTATGTTGGAAATTTCTTCAATGTTGAGAAGTGAAAGCAGTTTGAGATTCCCTAAGAAACCAGCATTCTCAACAGAAAATGAAGTGAGAGAAGCAAATGATGAAAAAATGCATATCGAAGTGTGTTCAATCAATGAAGTAACAATCTCTGAATTAGTCGCGCGCTAG 1206 0.3698 MDLNIWSTKGEDRPRKKDRLKIILTVVAASVLLCSAIIVILWRRMFKPKGRRKAVTDSAENFPDNTVHLKVFSFSDIEEATDRFSDTNMIGKGGYGTVYEGILQDGQKIAVKKRSQGSAQGFEEFKNEVTVTARLQHVNLVQLLGFCTHREEQMLVYEYMPNKSLDSYLFDPTRRCLLDWRNRVDIIEGIVQGLLYLQEYSRVRIIHRDIKASNILLNDKLKPKISDFGMARIFAKDELEANSCKIVGTYGYVPPEYVKSGIYSTKSDVYSFGVLILQIISGMRTTRLYGEHENLYLAGYAYELWKEGKGMEFMDTSLDDTSSPCKLLRCMNIALLCVQENANDRPSMLEISSMLRSESSLRFPKKPAFSTENEVREANDEKMHIEVCSINEVTISELVAR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1622 401 PIRSF TyrPK_CSF1-R 169 397 - -
Prci4g1622 401 PIRSF TyrPK_CSF1-R 7 60 - -
Prci4g1622 401 PIRSF TyrPK_CSF1-R 78 177 - -
Prci4g1622 401 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 398 - -
Prci4g1622 401 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Prci4g1622 401 Pfam Protein tyrosine and serine/threonine kinase 88 355 IPR001245 GO:0004672|GO:0006468
Prci4g1622 401 SUPERFAMILY Protein kinase-like (PK-like) 66 358 IPR011009 -
Prci4g1622 401 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1622 401 Gene3D Phosphorylase Kinase; domain 1 48 159 - -
Prci4g1622 401 Gene3D Transferase(Phosphotransferase) domain 1 160 374 - -
Prci4g1622 401 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 160 362 - -
Prci4g1622 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci4g1622 401 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 47 159 - -
Prci4g1622 401 SMART serkin_6 84 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1622 Prci-Chr4 14409138 14411931 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1622 3 369 Receptor kinase-like Gene Family AT4G05200 47.425 1.38e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci4g1622 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1622 - - pcin:129308855 800.816