Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1618 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTCGACTGCTGCTTCACGACGGATGCTTGGAATGAAGAAAATTATAAAGTCTACATGGACGGGATTGTTGCTCAACTTCGAGAGTACTTGCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACGAAGAGTCAGATGGCGAACATCTTGTCAGAGTATGACATGACTATCATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCACTTGGACAGCATAATGTGCTGTTGATGCACTGCGAACGTGGTGGCTGGCCGGTTTTGGCTTTCATGCTGGCTGCACTCTTGATTTATCGAAAGCATTATAGTGGAGAACAGAGGACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCAGTTTTTGTCACCGTTAAATCCAATTCCTTCCCAACTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAAATTGGCCTCCACTGGACAGGGCACTCACGTTGGACTGCATCATTCTCAGATGTATCCCGGACTTTGATGGGGAAGGTGGATGTTGTCCAGTATTTCGAATTTATGGACAGGATCCTTTTCTTGCTGATAAAACTCCGAAAATCCTGTACTCGACGCAGAAGAAAAACAAAACCTTACGATTTTACAAGCAGGGGGAGTGTGAACTAATTAAAATTGACATCAACTGTCATATCCAAGGTGACGTTGTGATTGAGAGCATTAACTTGACCAGTGACATGGACCATGAACGGATGATGTTCCGAGTCATGTTCAACACAGCTTTTATTAGGTCTAATATATTGATGCTTAACCGGGATGAAGTTGACATTTTATGGGATGCTAAAGATCTCATCCCCAAGGATTTCAGAGCAGAGATCCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTTATTGCGGATGGTACCTCATGCTTTGAGGAGAAGGAGGGACTACCAGTGGAAGCATTCGCCAAAGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGTTGCACTAAATGTACTCCAACAACTTAGTGCTTCAGTGCATGACACGATGGATAAAATTTCTACTCAGCAGCATGATACTGGATATTTGTTGCATGAAGAAGATCTTGAAGTGCCTCAAGTAAAACAGAATGAAGTGAAAAGGTTATTGCCCTTGAATAATGAATCCCTGGATAGTGATTTGAGTAAAAAAGTAGATAAGCCTATCAAGACCGGTGTTTCTCCACTACTACGTCGAAGCTCTGACATTATCTGTCAGAAGATGCCCATTACGTCTATGAGAACCTCAGAGTCCAGTAAACATGTGACAAGTTCTACAAATCTTGATGTAAATACACTGGTGGATGATCTTGCCTTGTCTAGTTCTGTAGATACTTCCAGTGAATCACTTTCACCAAAAACACCTCCACAGCATCCTTCCTTGATTAGTAAATCTAAAAACGTTCATGATACTCCACCTAACACACAATTACCTCCTCTTCTTTCCCCTTTAGGACCATGTTATCCTGTTACTGGAGAAATTGATGCCCAATCACAAGACAGAAGTGAGTCATCAATCTTTAGTTCAACATCTGGAGCTTCATTATCAAGTACCTTTCCAAATAAGGTTCCTCCTGACGCTGCTTCCCATCCTTCAGCTTCACTAATGACTTCAACTCTGCCATCTCCTTCCCCTACAACCTCTCTGAAGGAGATTCTACTTGTTAGAACAAAACCTGCTTCATCCACTTCATGCCCTCCAACACCACCCACACCCCCAACTCCTCCTCAAAAGGAGCATAAACTGGTTAGAGCTGTACCTCCCCCACCACCACCGCCTCCACAGAAAGAGCAATCATTGGTTGGAGCCATGCCTCCACCACTCCCACTAAGGGAGGAATCACATAATCAACTTGGACCTCCTCCTCTAAAGGAGGAGCCTAAAGTTAAAACTGGACCGCCACCCCTTCCACCACTTCCTCCAAAGGTGGAGCCACCTGTTAGTGTTAAGCCTCCTCCACCTCCTCCTCCTCCTCCACGTCTTCCTGGGAAATCTGATTCTACCACAGTATCACCACCACCACCACCACCACCTCCTCCTCCTCCACGTCTTCCTGGGAAATCTAGTTCTACCACAGTATCACCGCCGCCACCTCCTCCTCCCCCTGCTGCTGCACTTTCCTCCAAGCACCTTAATCCTTCATTGCAGAATTCTACATCCGTTCCTGCTGCTCCTAATGCTCCACCACCTCCAGTTCCCTTTAGCAAAGGAGATCTAAAATCAGGCAATGGTTTTCTAGGATATGCCTCTATTGGTGGTGATGGAAATATTGTGTCAAGTACAACAGGACCACGAGGACGAATTCTGTCTCGTACAATAAGTAGTATGAAAAATCAAAATAAAAAGCTGAAGCCATTGCATTGGCTAAAATTATCTCGAGCTGTGCAAGGAAGTTTGTGGCACGAGGCAGCGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATCTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGCCCCTACCAAGAAAGTAGGTGTTAGAAGCTCAGCTGGGCCTAAATCTGATAAAGTACAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCATGATTTGATGAGCTCAGTGCTAGCACTAGAGGACTCAGCCCTTGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGCTATACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCACGGGTAGAGTCCAAGCTCAGAGTGTTTTCATTCAAGATTCAGTTCCACTCTCAGGTTTCTGACCTCAGAAAAAGCCTGAATATTGTAGATGCTACTGTAGAAGAGATTAAGAATTCTGTCAAGTTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCCAGGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACTGAGATGCGAGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCAGAAGTTCTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCTGCTGCCAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTCTCAACCTCTGAAAATGATGGTCCTATATCTGAGACATTCCGCAAGACTCTGAAAGATTTCCTCCGTTTTGCTGAAGCTGAAGTCCGATCACTGGCTTCACTATATTCTGGCGTGGGAAGGAAAGTAGACGCGTTGATTGTTTATTTTGGTGAAGATCCGTCTCGCTGCCCTTTTGAGCAAGTTGTGTCAACTTTGCTCAACTTCACGAGGATGTTCAACAAAGCCAATGAAGAAAACTGCAAGCAGCTTGAGTTTGAAATGAAGAAATCATCTGATAATGAGAAAAAGATATGCGAATCACAGAGGATACTGCCGACAGCAATCAGGACTGGTAACGTCAAGTGA 3747 0.4436 MTLLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYKVYMDGIVAQLREYLPDASILVFNFRQEETKSQMANILSEYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKHYSGEQRTLDMVYRQAPRELLQFLSPLNPIPSQLRYLQYISRRNVAINWPPLDRALTLDCIILRCIPDFDGEGGCCPVFRIYGQDPFLADKTPKILYSTQKKNKTLRFYKQGECELIKIDINCHIQGDVVIESINLTSDMDHERMMFRVMFNTAFIRSNILMLNRDEVDILWDAKDLIPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPVEAFAKVQEIFNHVDWLNPKADVALNVLQQLSASVHDTMDKISTQQHDTGYLLHEEDLEVPQVKQNEVKRLLPLNNESLDSDLSKKVDKPIKTGVSPLLRRSSDIICQKMPITSMRTSESSKHVTSSTNLDVNTLVDDLALSSSVDTSSESLSPKTPPQHPSLISKSKNVHDTPPNTQLPPLLSPLGPCYPVTGEIDAQSQDRSESSIFSSTSGASLSSTFPNKVPPDAASHPSASLMTSTLPSPSPTTSLKEILLVRTKPASSTSCPPTPPTPPTPPQKEHKLVRAVPPPPPPPPQKEQSLVGAMPPPLPLREESHNQLGPPPLKEEPKVKTGPPPLPPLPPKVEPPVSVKPPPPPPPPPRLPGKSDSTTVSPPPPPPPPPPPRLPGKSSSTTVSPPPPPPPPAAALSSKHLNPSLQNSTSVPAAPNAPPPPVPFSKGDLKSGNGFLGYASIGGDGNIVSSTTGPRGRILSRTISSMKNQNKKLKPLHWLKLSRAVQGSLWHEAAKSGEASKAPEIDISELESLFSAAVPSSAPTKKVGVRSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLHDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFHSQVSDLRKSLNIVDATVEEIKNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTEMRARNNKMTLMHYLCKVLADKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAISKGLEKVIQELSTSENDGPISETFRKTLKDFLRFAEAEVRSLASLYSGVGRKVDALIVYFGEDPSRCPFEQVVSTLLNFTRMFNKANEENCKQLEFEMKKSSDNEKKICESQRILPTAIRTGNVK 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1618 1248 MobiDBLite consensus disorder prediction 555 583 - -
Prci4g1618 1248 Coils Coil 1207 1227 - -
Prci4g1618 1248 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Prci4g1618 1248 Gene3D - 196 340 - -
Prci4g1618 1248 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Prci4g1618 1248 PANTHER FORMIN-J 1 702 - -
Prci4g1618 1248 Gene3D Formin, FH2 domain 830 1217 IPR042201 -
Prci4g1618 1248 MobiDBLite consensus disorder prediction 591 622 - -
Prci4g1618 1248 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Prci4g1618 1248 ProSiteProfiles Formin homology-2 (FH2) domain profile. 833 1232 IPR015425 -
Prci4g1618 1248 MobiDBLite consensus disorder prediction 686 766 - -
Prci4g1618 1248 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Prci4g1618 1248 SMART PTEN_C2_2 197 336 IPR014020 -
Prci4g1618 1248 MobiDBLite consensus disorder prediction 623 660 - -
Prci4g1618 1248 Pfam Formin Homology 2 Domain 836 1206 IPR015425 -
Prci4g1618 1248 SMART it6_source 833 1243 IPR015425 -
Prci4g1618 1248 MobiDBLite consensus disorder prediction 503 801 - -
Prci4g1618 1248 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Prci4g1618 1248 MobiDBLite consensus disorder prediction 503 535 - -
Prci4g1618 1248 SUPERFAMILY Formin homology 2 domain (FH2 domain) 846 1223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1618 Prci-Chr4 14246502 14260122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1618 782 1230 Protein tyrosine phosphatase (PTP) family AT5G58160 68.222 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1618 - - aprc:113848377 1611.66