Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1613 ATGGGTTTGGGATTATTTGGTTCTGTTTTGATTCTGACGCTTTTCTTGAAGCACCTTGCATGCCAGCAGCCAAATACCGATGGATTCTTTGTGTCTGAATTCTTGACCAAGACAGGTTCATCTTCAACTTTTTCCAAATCCTACAACTTCTCTGGTTCTTTCTGTTCATGGCATGGTGTTCTCTGTGATGCTCAAAAAGAACATATCGTTGAGTTCAAAGCTTCTGGGTTAGGCCTCTCTGGTCCTTTTCCTGATAATACCATTGGCAAGCTCAACAAGCTTCAATCTTTGGATCTTAGCAGCAACAAAATCACAGGGTTGCCTTCAGATTTCTGGAGTTTAACCTCTCTCAAGAGTCTTAACCTTTCTTTCAACCAGATTTCTGGTTCACTGTCAAACAACATTGGCAATTTTGGTTCCTTGGCAACCTTAGACTTATCTAACAACAATCTCTCTGAAGAAATTCCTGAAACTATAGGCTCCCTTGTCAGTCTTCGCTTCCTCAACCTTAGCCGGAACAGGTTCGAACAAACCATTCCTTGGGGGATTTTAAAGTGTCTGTCTCTTGTCTCAATTGATCTTTCATCAAATCGTCTAAATGGGACACTTCCAGAGGGTTTTGGTGCTTCCTTCCCAAAGCTTCAAATGTTGAACCTTGCAGGGAATAGCATTCATGGTCGAGATTTTAACTTTTCTGGGTTGAAGTCAATTGTTGCTCTCAATTTGTCTGGAAATTTGTTTCAGGGTTCGCCCATGGGTGCATTTCAGGAAAGCTTGGAGGTCATTGATCTTAGTAAGAACCAATTTCAGGGTCACATTTCTCAAGTACAATTCAATTCTGACTTTAACTGGTCTTGCATAGTTTATCTGGATTTGTCCGAGAATCAGTTTAGTGGTGAAATTTTCCATAATTTGAATGAAGCCCAAAATCTGAAATACCTAAATCTTGCGCACAATAGATTTACCAGACAGAAATTCCCACGGATTAGAAAGCTCTCTGTGCTGGAATACTTGAACTTGTCTAGAACTAGCCTTGTTGGTCACATTCCTGATGAAATCTCACAACTGAAGCATTTGAATGCTCTGGACATCTCTATGAATCATCTCACAGGGAGAATCCCCTTACTGAGCAACAAAAACCTCCAAATTCTTGATCTTTCTGTGAACAATTTGAGTGGTGACATACCTCAATCTCTCTTAGACAATCTCCCACGAATGGTGAAATATAACTTCTCATACAATAACTTCACCTTCTGTGATTCAACATTTACCCCTGAAATCCTCAAGACGGCATTCTATGGATCGGTTAACAGCTGCCCAATTGCTGTAAACCCCCCAATTTTAAGAAAAAGAGACACTGATCGAAATGGAATGAAGCTGGCTCTTGGATTAACTCTAGCAATGGTCTGTCTTCTTGCTGGGCTTTTATTTCTAGCATTTGGCTGTAGGAGGAAAAGAAAAATGTGGGCAGTGAAGCAAGCTTCATACAAAGAAGAACAGAACATCTCAGGGCCCTTTGAATTCCAGACTGATTCAACAACCTGGGTGGCTGATGTCAAGCAAGCAACTTTGGTCCCGGTAGTAATTTTTGAGAAGCCACTGTTGAACATCACATTCGCAGACCTATTGTCTGCAACTTCAAACTTTGACAGAGATACCCTTCTGGCTGAAGGGAAGTTTGGGCCTGTTTATAGAGGCTTTCTACCTGGTGGGATTCATGTAGCAGTTAAGGTTCTGGTTGTTGGCTCTACATTGACAGATCAAGAAGCTGCAAGGGAGCTCGAATATCTTGGTCGGATCAAGCATCCCAATCTTGTTCCTTTAACTGGGTATTGTCTAGCTGGAGATCAGAGGATTGCTATTTATGAATACATGGAGAATGGGAACCTGCAAAACTTGCTCCATGACTTGCCACTTGGGGTGCATAGTCCAGAAGATTGGAGCACAGACACATGGGAGGAAGATGACAACGGTGGTGGGATTCAAAATGCTGGCTCTGAGGGATTACTCACATCTTGGAGATTTCGTCACAAGATTGCCCTTGGCACTGCTCGAGCACTGGCCTTTCTTCACCATGGCTGCTCACCTCCAATTGTTCACAGAGATGTCAAGGCTAGTAGTGTTTATCTAGACTACAACCTAGAGCCAAGGCTGTCTGATTTTGGTCTAGCTAAGGTTTTTGGAGATGGCTTGGACGACGAAATTGCACGTGGCTCACCTGGTTATGTTCCACCAGAGTTTTCCCAACCTGAACAGAACTCCCCAACACAGAAATCTGATGTGTACTGTTTTGGGGTTGTGCTGTTTGAGTTGATAACTGGAAAGAAACCTGTTGGGGATGATTATCATGATGAAAAGGAAGGAACTTTGGTTAGTTGGGTGAGAGGATTGGTGAGAAAGAACGAAGCTTCAAGAGCAATTGATCAGAAAATTCGCGACACAGGGTCAGAAGAACAGATGGAGGAGGCCATCAAGATCGGTTATCTTTGCACAGCTGATCTTCCATTGAAGCGACCTAGCATGCAGCAGGTAGTTGGACTGCTTAAAGATATTGAGCCTTCTGCTAGTTAA 2571 0.4271 MGLGLFGSVLILTLFLKHLACQQPNTDGFFVSEFLTKTGSSSTFSKSYNFSGSFCSWHGVLCDAQKEHIVEFKASGLGLSGPFPDNTIGKLNKLQSLDLSSNKITGLPSDFWSLTSLKSLNLSFNQISGSLSNNIGNFGSLATLDLSNNNLSEEIPETIGSLVSLRFLNLSRNRFEQTIPWGILKCLSLVSIDLSSNRLNGTLPEGFGASFPKLQMLNLAGNSIHGRDFNFSGLKSIVALNLSGNLFQGSPMGAFQESLEVIDLSKNQFQGHISQVQFNSDFNWSCIVYLDLSENQFSGEIFHNLNEAQNLKYLNLAHNRFTRQKFPRIRKLSVLEYLNLSRTSLVGHIPDEISQLKHLNALDISMNHLTGRIPLLSNKNLQILDLSVNNLSGDIPQSLLDNLPRMVKYNFSYNNFTFCDSTFTPEILKTAFYGSVNSCPIAVNPPILRKRDTDRNGMKLALGLTLAMVCLLAGLLFLAFGCRRKRKMWAVKQASYKEEQNISGPFEFQTDSTTWVADVKQATLVPVVIFEKPLLNITFADLLSATSNFDRDTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGRIKHPNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGVHSPEDWSTDTWEEDDNGGGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIVHRDVKASSVYLDYNLEPRLSDFGLAKVFGDGLDDEIARGSPGYVPPEFSQPEQNSPTQKSDVYCFGVVLFELITGKKPVGDDYHDEKEGTLVSWVRGLVRKNEASRAIDQKIRDTGSEEQMEEAIKIGYLCTADLPLKRPSMQQVVGLLKDIEPSAS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1613 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 287 440 - -
Prci4g1613 856 ProSiteProfiles Protein kinase domain profile. 549 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1613 856 Pfam Leucine Rich repeat 377 394 IPR001611 GO:0005515
Prci4g1613 856 SUPERFAMILY Protein kinase-like (PK-like) 527 848 IPR011009 -
Prci4g1613 856 Gene3D Transferase(Phosphotransferase) domain 1 625 856 - -
Prci4g1613 856 Gene3D Ribonuclease Inhibitor 30 183 IPR032675 -
Prci4g1613 856 CDD STKc_IRAK 555 851 - -
Prci4g1613 856 Pfam Leucine rich repeat 188 246 IPR001611 GO:0005515
Prci4g1613 856 Pfam Leucine rich repeat 85 127 IPR001611 GO:0005515
Prci4g1613 856 Gene3D Phosphorylase Kinase; domain 1 509 624 - -
Prci4g1613 856 SUPERFAMILY L domain-like 230 418 - -
Prci4g1613 856 PRINTS Leucine-rich repeat signature 94 107 - -
Prci4g1613 856 PRINTS Leucine-rich repeat signature 114 127 - -
Prci4g1613 856 Gene3D Ribonuclease Inhibitor 277 433 IPR032675 -
Prci4g1613 856 Gene3D Ribonuclease Inhibitor 188 276 IPR032675 -
Prci4g1613 856 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515
Prci4g1613 856 FunFam Putative LRR receptor-like serine/threonine-protein kinase 510 624 - -
Prci4g1613 856 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 108 203 - -
Prci4g1613 856 FunFam Calmodulin-binding receptor kinase CaMRLK 257 375 - -
Prci4g1613 856 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
Prci4g1613 856 Pfam Protein tyrosine and serine/threonine kinase 553 846 IPR001245 GO:0004672|GO:0006468
Prci4g1613 856 SMART LRR_typ_2 162 186 IPR003591 -
Prci4g1613 856 SMART LRR_typ_2 91 113 IPR003591 -
Prci4g1613 856 SMART LRR_typ_2 234 257 IPR003591 -
Prci4g1613 856 SMART LRR_typ_2 114 137 IPR003591 -
Prci4g1613 856 SMART LRR_typ_2 138 161 IPR003591 -
Prci4g1613 856 SMART LRR_typ_2 332 356 IPR003591 -
Prci4g1613 856 SUPERFAMILY L domain-like 45 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1613 Prci-Chr4 14139357 14142747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1613 79 852 Receptor kinase-like Gene Family AT4G39400 33.785 3.95e-109 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Prci4g1613 PK_Tyr_Ser-Thr 6.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1613 - - gmx:100787157 1300.8