Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1612 ATGGCTGACCGTGAGAGCTCCGGAGCTCTCATGGACGATAATTCTGAACACCCAGAAAGCAACGAATCAACAGCAGCAGTAGAAGAAGAGCAAGAAAAGGGAGAGGAACGAAATCGAGTCTTTGAAGCACGGCTTAGCGAGTGGCATCAAGGCAAGTTGCAGAGTTCTGAACCTTCCCAGGAAGCAGAGCCTAATTTGGAAACCCTAGCTGTGCCCACTTCGCTTGAAACCGACGAGAAAGATCAGAGTGCCGATTTGCAGGCGAGCTCTGGTACGCAGGAGGCTTTGGAAGGCGAAAAGAAGGAGCCAGTTGGATCTTCTGGCAAGGAACTTACGAAAAGAGAAGCAGTCCAGACAACTCAAACTCAGATAGAAAGTCAACTTCAGGTGTCAGTGTGTTCAAGTGCATTGTCTGAATTGTCTCCAACATCTGTAACACAATCTTTATCATCTGCTCCTAGTCCAGCTGTACCAGAACAAAGAAAGTCTTCTTCAAAGGTTAACAAGGTAAATGTGCTGGAAGTAGACCAGAAAAAGCCTGCTCACCGTAATACCTTATCTCTTCTTTCTATTGTGAGGACATCCACATCTGATGGATACAACTGGCGTAAGTATGGCCAGAAGCAAGTTAAAAGTCCTACAGGGTCTCGAAGTTATTACAGGTGTACTCATTCAGAATGTTGTGCAAAGAAGATTGAGTGCTGTGACCATTCAGGCCATGTAGTAGAGGTTGTATATAAAAGTCAACACAGCCATGATCCACCGCAAAAGACTAACTCTGGTAGAGAAAGTAAGTTTGCACCATCCAAACGGCCTAATCTAGAGAACATTGTTCTTGAGAATCCCATCAGAGTGCTTAATGATTCAAATCCGTGCCCTTCTTCAAAGGAACCTCCACAAGAAGCACCATGCAGTGCTGATAGGAAAAGACAAAACTCATCTGATCAAAGTGAGAATGGTAAAGCTGCCTTGAAGGATGAGCATGCTATTGTGACAGAGCCCAAAAAAAGAGTGAAAAAAGGTGACTATACGTGCTTGGATTCTCCAGTAAAACCTGGAAAGAAACAGAAGTTTGTTGTACATGCAGCAGGGGATGTGGGGATATCGGGTGATGGATATCGATGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAACCCTCATCCAAGAAACTACTACAGATGCACTTCTGCTGGATGTCCGGTCCGTAAACACATCGAGACTGCCGTAGATAACTCTAATGCTGTAATCATTACATACAAGGGAGTTCATGATCATGACATGCCGGTGCCTAAGAAACGGCATGGCCCGCCGAGTGCTCCTCTCGTGGCTGCAGCAGCACCTGCTTCAATGAACAATTCACAACAGTTAAAGAAAATAGACAAACTGCAGAAGCAAAAATCTTCTACGCAGTGGTCGGTGGACACTGAAGGCGAATTAACCGGGGAAGCCTTGGAACTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACTCTCTTGAGCATCGGTTTTGAAATAAAGCCTTGCTGA 1530 0.4556 MADRESSGALMDDNSEHPESNESTAAVEEEQEKGEERNRVFEARLSEWHQGKLQSSEPSQEAEPNLETLAVPTSLETDEKDQSADLQASSGTQEALEGEKKEPVGSSGKELTKREAVQTTQTQIESQLQVSVCSSALSELSPTSVTQSLSSAPSPAVPEQRKSSSKVNKVNVLEVDQKKPAHRNTLSLLSIVRTSTSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGHVVEVVYKSQHSHDPPQKTNSGRESKFAPSKRPNLENIVLENPIRVLNDSNPCPSSKEPPQEAPCSADRKRQNSSDQSENGKAALKDEHAIVTEPKKRVKKGDYTCLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNSQQLKKIDKLQKQKSSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1612 509 Gene3D WRKY domain 188 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 Gene3D WRKY domain 354 430 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 MobiDBLite consensus disorder prediction 311 327 - -
Prci4g1612 509 MobiDBLite consensus disorder prediction 1 125 - -
Prci4g1612 509 ProSiteProfiles WRKY domain profile. 197 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 MobiDBLite consensus disorder prediction 251 266 - -
Prci4g1612 509 MobiDBLite consensus disorder prediction 1 46 - -
Prci4g1612 509 FunFam WRKY transcription factor 354 430 - -
Prci4g1612 509 SUPERFAMILY WRKY DNA-binding domain 194 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 MobiDBLite consensus disorder prediction 49 77 - -
Prci4g1612 509 SUPERFAMILY WRKY DNA-binding domain 365 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 Pfam WRKY DNA -binding domain 198 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 Pfam WRKY DNA -binding domain 371 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 SMART WRKY_cls 196 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 SMART WRKY_cls 369 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 MobiDBLite consensus disorder prediction 95 109 - -
Prci4g1612 509 MobiDBLite consensus disorder prediction 144 165 - -
Prci4g1612 509 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 137 458 IPR044810 GO:0003700
Prci4g1612 509 ProSiteProfiles WRKY domain profile. 364 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1612 509 MobiDBLite consensus disorder prediction 247 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1612 Prci-Chr4 14119166 14125216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1612 65 509 WRKY Transcription Factor Family AT4G30935 50.327 3.48e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci4g1612 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1612 - - gmx:100127377 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1612 4 14119166 14125216 Prci4g1612 4 14119166 14125216 ECH