Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1604 ATGAAGGAGAAGAGAGTGACTAACATTTATAGGTTGGATGACCTGGACTCTAGGCTCTCTTCATCTTCTGATACTCGAGTTAAGAAAAGCGGATTTAGTATTGAGAAATTAAACCATGGTAGCCATGCAAACACTGCAACCTCTAGGTCTTTCAGAAGAGGAATGATAAAGGGATCTGAAGGACTGAAGTCAATTGGACGATCACTTGGATTCAGGGTATCCAAGGCAGTGTTCCCTGAAGATCTGGAAATATCAGATAAGAAGATCTTTGATCCTCAAGACAAATTTTTACTCCTATTGAATAAATTTTTTGTTGTCTCGTGCATTTTGGCTGTGTCTGTTGATCCATTATTTTTCTATCTTCCTGTCATTGATGATCCATCGAACTGCCTTGGCATAGACCGAAAGTTGGCAATCATAGTTACCACCTTGAGGACAACAGTTGATGTTTTTTATCTTATACACATGGCTCTTCAATTCCGCACTGCCTATATTGCCCCATCATCTCGCGTCTTTGGACGGGGGGAGCTTGTGATAGATTCAACACAGATAGCCAAGCGATACTTGCTGCGGTATTTCATTGTTGACTTTCTATCTGTGTTGCCCTTACCACAGATTGTGGTTTGGAGATTTCTTCAAAGATTAAAAGGATCAGATGTGTTAGCAACAAAGCAGGCCTTGCTGTTTATAATCTTACTGCAGTATGTTCCTAGGTTTCTCCGGATGGTACCACTGGCTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCTGGTGCTGCAAATTATTTGCTGTTATACATGCTTGCCAGTCATGAGGCATGCAAGGAAGGGTGCAATAAGAATTTCTTGTATTGTGGTAACCAGCGTATGGAAGGTTATAATGACTGGAACAAGACAAGTGATCAAATTCTTAAGGAACATTGTTCTACAGATGACAATTCGCCTTTTGATTTTGGAATTTTTAAACAAGCATTGTCATCTGGCATTATTTCATCTAAAAAATTCGTGTCCAAATACTGTTACTGTTTATGGTGGGGGCTTCAGAATTTGAGCACGCTTGGCCAGGGGCTTCAAACCAGCACTTATCCTTGGGAAACTATCTTCTCAATAGCGCTGGCCATATTTGGTCTTATCCTCTTTGCGCTTCTCATTGGTAACATGCAGACGTATCTTCAGTCTATTACCTTAAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCACCGTTTGCTCCCACCAGAGCTGAGAGAACGGGTTAGACGCTATGATCAATATAAGTGGTTGGCAACACGTGGTGTGGATGAAGAAAGTTTGGTTCAAACACTTCCGAAGGATCTTAGAAGAGATATCAAGCGTCACCTGTGTCTGGCTCTAGTGAGAAGGGTTCCATTGTTTGAGAGTATGGATGAGAGATTGCTTGATGCCATTTGTGAGAGACTGAAACCGTGTCTATTTACGGAGAATACTTACATTGTACGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATTATTCGTGGTCGGCTCGAAAGTGTTACAACAGATGGCGGGAGAAGCGGATTTTTTAACCGTGGTTTCCTTAAAGAGGCTGACTTCTGTGGGGAGGAGCTTTTAACCTGGGCACTGGATCCTAAATCTGGTTCTAACCTCCCAACTTCTACTCGTACAGTTATGGCATTAACAGAAGTTGAGTGCTTTGCCTTAATCGCTGACGAGTTAAAATTTGTTGCTAGTCAGTTTAGACGCCTTCATAGTAGACAGGTTCAACACACATTCCGGTTCTACTCACAGCAATGGAGGACTTGGGCTGCCTGCTTTATCCAAGCCGCATGGCGGCGATATTCTAAGAGGAAGGCCCTGGAGATTCGTCGAAAGGAAGAACCTGACGACTCAGAAGGAACTCACAGCAATGCCGGTGGCAGTTCATACAGCATTGGTGCTACCTTCTTAGCGTCAAGGTTTGCAGCCAATGCTCTTCGTGGCATACATCGCAATCGGAACGCTAAGACTGCAAGGGAGTTGGTGAAACTACAGAAACCTCCAGAACCTGACTTTACTGCTGATGATGCAGATTAG 2109 0.4329 MKEKRVTNIYRLDDLDSRLSSSSDTRVKKSGFSIEKLNHGSHANTATSRSFRRGMIKGSEGLKSIGRSLGFRVSKAVFPEDLEISDKKIFDPQDKFLLLLNKFFVVSCILAVSVDPLFFYLPVIDDPSNCLGIDRKLAIIVTTLRTTVDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDSTQIAKRYLLRYFIVDFLSVLPLPQIVVWRFLQRLKGSDVLATKQALLFIILLQYVPRFLRMVPLASELKRTAGVFAETAWAGAANYLLLYMLASHEACKEGCNKNFLYCGNQRMEGYNDWNKTSDQILKEHCSTDDNSPFDFGIFKQALSSGIISSKKFVSKYCYCLWWGLQNLSTLGQGLQTSTYPWETIFSIALAIFGLILFALLIGNMQTYLQSITLRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLATRGVDEESLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKSGSNLPTSTRTVMALTEVECFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKALEIRRKEEPDDSEGTHSNAGGSSYSIGATFLASRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTADDAD 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1604 702 Gene3D - 102 400 - -
Prci4g1604 702 Gene3D Jelly Rolls 473 593 IPR014710 -
Prci4g1604 702 ProSiteProfiles IQ motif profile. 611 640 IPR000048 GO:0005515
Prci4g1604 702 SUPERFAMILY Voltage-gated potassium channels 92 397 - -
Prci4g1604 702 Pfam Cyclic nucleotide-binding domain 496 585 IPR000595 -
Prci4g1604 702 CDD CAP_ED 475 606 IPR000595 -
Prci4g1604 702 Pfam Ion transport protein 100 402 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci4g1604 702 FunFam Cyclic nucleotide-gated channel 6 103 400 - -
Prci4g1604 702 SMART cnmp_10 475 606 IPR000595 -
Prci4g1604 702 FunFam Cyclic nucleotide-gated ion channel 1 473 591 - -
Prci4g1604 702 PRINTS EAG/ELK/ERG potassium channel family signature 344 361 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1604 702 PRINTS EAG/ELK/ERG potassium channel family signature 388 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1604 702 PRINTS EAG/ELK/ERG potassium channel family signature 370 381 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1604 702 PRINTS EAG/ELK/ERG potassium channel family signature 156 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1604 702 PRINTS EAG/ELK/ERG potassium channel family signature 438 445 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1604 702 SUPERFAMILY cAMP-binding domain-like 404 594 IPR018490 -
Prci4g1604 702 FunFam Cyclic nucleotide-gated ion channel 1 402 466 - -
Prci4g1604 702 Gene3D Helix hairpin bin 403 466 - -
Prci4g1604 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 696 - -
Prci4g1604 702 MobiDBLite consensus disorder prediction 682 702 - -
Prci4g1604 702 ProSiteProfiles cAMP/cGMP binding motif profile. 475 579 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1604 Prci-Chr4 14041087 14052882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1604 8 700 Ion Channels AT2G23980 73.140 0.0 1072