Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1601 ATGTTTTTAGGGCCGGGTTGCTCATCAGTGGCATATGGGGCATCAGAGGAAATTGGGCCATTCCGGATAAATAAAACCGGTTCTTCATTGTATCTTAACACGTATTCATGGAACAGAGAAGCAAATATTCTCTTTCTTGAATCACCTGCTGGTGTAGGTTTCTCCTACACAAATACAAGCTCCGACCTCAAAACTTCTGGGGACGAAAGGACAGCTCAGGATGCTCTAAATTTTCTAGTCAGATGGATGTCAAGATTCCCACAGTATCAGTACAGAGACTTCTACATTTCCGGGGAGAGTTATGCAGGGCACTATGTTCCCCAGTTGGCTCAAAAAATCTATCATTATAATAAAGCCAATCCTCAGATCATTAATCTCAAAGGTTTCATTGTGGGAAATGCTGTGACAGACAACTACTATGATGGGATTGGAACTGTGACATATTGGTGGAGCCATTGTATGATATCTGATAAATCATACAAAACTATCCTCACACACTGCAATTTCACGGCAGAGAAAACATCTAAAATATGTGATGATACTGTGCGTTATGCTATTAACCATGAATTTGGACGCATTGATCAGTACAGTATTTATACCCCTACATGCCCGACCAACAGTAGCAGTACTGTGCGGCACTTGAGGCTCAAGAGTACAATTTTACATAGGATTTCAGGGTATGATCCATGCACTGAAAATTATGCAGAGAAATACTATAATCTCCCTGAAGTGCAAAAAGCAATGCATGCAAATGTTACAGGCATTCCTTACAAATGGACTTCATGCAGCGATGTGCTCTTAAAATACTGGAATGACTCTGCAGTTTCTGTATTGCCCATTTACAAAGAGTTAATTGCGGCTGGTTTGAGAGTCTGGGTTTTCAGTGGGGACACAGATTCAGTGGTACCAGTGACTGCCACTAGATTTTCCCTCAATAGTCTCAACCTCAAGATTAATACTCGTTGGTATCCATGGTACTCTGGTGGACGGGTAGGTGGATGGACAGAGGTCTATGATGGCCTAACTTTTGCAGTAGTACGAGGAGCAGGGCATGAAGTGCCATTGTTTCAGCCGAGAAGAGCTTTCACTCTGTTCAAGTCCTTCTTGGAAGGAAAGAAGCTTCCAACATCTTGA 1134 0.4224 MFLGPGCSSVAYGASEEIGPFRINKTGSSLYLNTYSWNREANILFLESPAGVGFSYTNTSSDLKTSGDERTAQDALNFLVRWMSRFPQYQYRDFYISGESYAGHYVPQLAQKIYHYNKANPQIINLKGFIVGNAVTDNYYDGIGTVTYWWSHCMISDKSYKTILTHCNFTAEKTSKICDDTVRYAINHEFGRIDQYSIYTPTCPTNSSSTVRHLRLKSTILHRISGYDPCTENYAEKYYNLPEVQKAMHANVTGIPYKWTSCSDVLLKYWNDSAVSVLPIYKELIAAGLRVWVFSGDTDSVVPVTATRFSLNSLNLKINTRWYPWYSGGRVGGWTEVYDGLTFAVVRGAGHEVPLFQPRRAFTLFKSFLEGKKLPTS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1601 377 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 4 358 IPR001563 GO:0004185|GO:0006508
Prci4g1601 377 FunFam Carboxypeptidase 277 371 - -
Prci4g1601 377 FunFam Carboxypeptidase 43 205 - -
Prci4g1601 377 SUPERFAMILY alpha/beta-Hydrolases 4 375 IPR029058 -
Prci4g1601 377 Gene3D alpha/beta hydrolase 3 205 IPR029058 -
Prci4g1601 377 PRINTS Carboxypeptidase C serine protease (S10) family signature 33 45 IPR001563 GO:0004185|GO:0006508
Prci4g1601 377 PRINTS Carboxypeptidase C serine protease (S10) family signature 82 107 IPR001563 GO:0004185|GO:0006508
Prci4g1601 377 PRINTS Carboxypeptidase C serine protease (S10) family signature 341 354 IPR001563 GO:0004185|GO:0006508
Prci4g1601 377 PRINTS Carboxypeptidase C serine protease (S10) family signature 46 56 IPR001563 GO:0004185|GO:0006508
Prci4g1601 377 ProSitePatterns Serine carboxypeptidases, histidine active site. 341 358 IPR033124 GO:0004185
Prci4g1601 377 Pfam Serine carboxypeptidase 4 371 IPR001563 GO:0004185|GO:0006508
Prci4g1601 377 Gene3D - 277 371 - -
Prci4g1601 377 Gene3D - 230 267 - -
Prci4g1601 377 ProSitePatterns Serine carboxypeptidases, serine active site. 96 103 IPR018202 GO:0004185
Prci4g1601 377 FunFam Carboxypeptidase 226 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1601 Prci-Chr4 13927398 13932075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1601 235 374 Calmodulin-binding Proteins AT2G22960 29.078 1.05e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1601 K16297 - gmx:100785391 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1601 4 13927398 13932075 Prci4g1601 4 13927398 13932075 ECH