Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1600 ATGGCACTGATCATCAACACCAAATTTCTGCTTCTCTTCTTCTTCTTCTTGCTGTCGTGCCTGTCCACAGTTTTGGCTTCGCAAGAGGATGATCGAATCTGGGCCCTCCCTGGACAGCCGGCAGTCCCGTTTTCTCAGTTCTCCGGCTACGTCACCGTCGACGACCACCACGGCAGAGCACTGTTCTACTGGCTCACCGAGGCTTACACTTCCCCTCACACAAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCGGGTTGCTCATCAGTGGCATATGGGGCATCAGAGGAAATTGGGCCATTCCGGATAAATAAAACCGGTTCTTCATTGTATCTTAACACGTATTCATGGAACAGAGAAGCAAATATTCTCTTTCTTGAATCACCTGCTGGTGTAGGTTTCTCCTACACAAATACAAGCTCCGACCTCAAAACTTCTGGGGACGAAAGGACAGCTCAGGATGCTCTAAATTTTCTAGTCAGATGGATGTCAAGATTCCCACAGTATCAGTACAGAGACTTCTACATTTCCGGGGAGAGTTATGCAGGGCACTATGTTCCCCAGTTGGCTCAAAAAATCTATCATTATAATAAAGCCAATCCTCAGATCATTAATCTCAAAGGTTTCATTGTGGGAAATGCTGTGACAGACAACTACTATGATGGGATTGGAACTGTGACATATTGGTGGAGCCATTGTATGATATCTGATAAATCATACAAAACTATCCTCACACACTGCAATTTCACGGCAGAGAAAACATCTAAAATATGTGATGATACTGTGCGTTATGCTATTAACCATGAATTTGGACGCATTGATCAGTACAGTATTTATACCCCTACATGCCCGACCAACAGTAGCAGTACTGTGCGGCACTTGAGGCTCAAGAGTACAATTTTACATAGGATTTCAGGGTATGATCCATGCACTGAAAATTATGCAGAGAAATACTATAATCTCCCTGAAGTGCAAAAAGCAATGCATGCAAATGTTACAGGCATTCCTTACAAATGGACTTCATGCAGCGATGTGCTCTTAAAATACTGGAATGACTCTGCAGTTTCTGTATTGCCCATTTACAAAGAGTTAATTGCGGCTGGTTTGAGAGTCTGGGTTTTCAGTGGGGACACAGATTCAGTGGTACCAGTGACTGCCACTAGATTTTCCCTCAATAGTCTCAACCTCAAGATTAATACTCGTTGGTATCCATGGTACTCTGGTGGACGGGTAGGTGGATGGACAGAGGTCTATGATGGCCTAACTTTTGCAGTAGTACGAGGAGCAGGGCATGAAGTGCCATTGTTTCAGCCGAGAAGAGCTTTCACTCTGTTCAAGTCCTTCTTGGAAGGAAAGAAGCTTCCAACATCTTGA 1374 0.4454 MALIINTKFLLLFFFFLLSCLSTVLASQEDDRIWALPGQPAVPFSQFSGYVTVDDHHGRALFYWLTEAYTSPHTKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNTYSWNREANILFLESPAGVGFSYTNTSSDLKTSGDERTAQDALNFLVRWMSRFPQYQYRDFYISGESYAGHYVPQLAQKIYHYNKANPQIINLKGFIVGNAVTDNYYDGIGTVTYWWSHCMISDKSYKTILTHCNFTAEKTSKICDDTVRYAINHEFGRIDQYSIYTPTCPTNSSSTVRHLRLKSTILHRISGYDPCTENYAEKYYNLPEVQKAMHANVTGIPYKWTSCSDVLLKYWNDSAVSVLPIYKELIAAGLRVWVFSGDTDSVVPVTATRFSLNSLNLKINTRWYPWYSGGRVGGWTEVYDGLTFAVVRGAGHEVPLFQPRRAFTLFKSFLEGKKLPTS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1600 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 438 IPR001563 GO:0004185|GO:0006508
Prci4g1600 457 Gene3D - 357 451 - -
Prci4g1600 457 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
Prci4g1600 457 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Prci4g1600 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Prci4g1600 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Prci4g1600 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Prci4g1600 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Prci4g1600 457 FunFam Carboxypeptidase 27 285 - -
Prci4g1600 457 Pfam Serine carboxypeptidase 38 451 IPR001563 GO:0004185|GO:0006508
Prci4g1600 457 Gene3D - 310 347 - -
Prci4g1600 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 421 438 IPR033124 GO:0004185
Prci4g1600 457 SUPERFAMILY alpha/beta-Hydrolases 26 455 IPR029058 -
Prci4g1600 457 FunFam Carboxypeptidase 357 451 - -
Prci4g1600 457 FunFam Carboxypeptidase 306 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1600 Prci-Chr4 13927398 13934864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1600 315 454 Calmodulin-binding Proteins AT2G22960 29.078 1.02e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1600 K16297 - gmx:100783242 758.444