Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1589 ATGAGAGACGAAGCTAGACAGCCACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTATAGGATGATGGTTGCGGCTCGGCTTATGATTCTAGTATTGTTCCTTCAGTACAGAATCCTCCACCCAGTGCCTGATGCAGTTGGACTTTGGTTTACATCTGTAATATGTGAGATATGGCTTACATTGTCGTGGATAATAGATCAGATTCCCAGATGGTTTCCCATTGACCGGGAGACATACCTTGATCGGCTTTCACTCAGGTTTGAACCAGAGAATAAGCCGAATTTGTTTCCTCCAATAGATGTCTTTGTCACTACTGTGGACCCAATTAAGGAACCGCCATTAGTTACGGCTAATACTGTTCTTTCAATCTTGGCCATGGATTACCCTCCCAGTAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCTATGCTCACCTTTGAAGCTCTCCAAGAAACTGCAGAGTTTGCACGGAAGTGGGTACCCTTTTGCAAAAAATATTCTACAGAGCCTCGAGCACCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCACTCTACTTATGTCAGAGACCGCCGTACAATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATGCACTTGTAGCTAAATCCATGAGAGTTCCTCAAGAAGGGTGGACTATGCAAGATGGGACCCCATGGCCAGGAAACAATACCAATGATCACCCGGGAATGATACAAATTCTTCTTGCTCGCAGTGGAGGTCTTCAAGGAAATGAACTTCCATGTCTTGTCTACCTGTCTCGTGAGAAAAGGCCAGGGTTTCAACACTACAGCAAAGCTGGTGCATTGAATGCATTGCTTCGGGTATCTGCTTTGTTAAGCAATGCTCCTTTTGTGCTGAACTTGGATTGCAATCACTACGTGAATAACAGCAAGGCTGTGAGAGAGGCCATGTGTTTCTTCATGGACCTACAAGTTGGAAAGACCATTTGCTTTGTCCAGTTCCCGCTAAGATTTGACAGCCTTGATAAGCACGATCGTTATGCCAACAGAAATACTGTTTTATTTGATATTAATTTGAGGTGCCTGGATGGAATTCAAGGACCTATTTATATTGGTTCAGGATGCATCTTCAGGAGGAAAGCTTTAAATGGCAGTGATCCTCCGAAGACTTCAAAGCGCCCAAAAATGGTAGGCTGTGGCTGCTGTCCTTGTTTTGGATCACGCAAGAAGCTACAAGTGCACTCTAAGCATGATGGAAATGAAGAAGATGCCCCAGCCGTGACAGGTGACCAAAATTCCTCATACACAGCAACCACTTTTCTTTTTCCCTCTTTTAGCTCAACACCACTTTTTCCACATCTGACAGGAACAGATGAAGACAACCAGCTTTTAACATCAGAGATGAATTTTGAAAATAAATTTGGGAAATCAGCAGTTTTTGTGAGCTCTTCCATAACAGAAGAGGGTGGTGTTCCTTCTACCTCTAATCAGGCAGCCTTGCTTAAAGAAGCCATTCATGTCATGAGTAGCAGCTATGAAGACAAAACCTTATGGGGATACGAGGTGGGTTGGAACTATGGATCTATATCATCAGATATTCTGACAAGTTTTAAAATGCACTCTCTTGGTTGGAGATCAGTGTATTGCATGCCAAAAAGACCTGCATTCAGGGGTACTGCTCCTATCAACCTTTCAGATCGACTGAGTCAGGTGCTTAGATGGGCAGTTGGATCACTTGAGATCCTTTTCAGCCGCCACTGCCCCATACTGTATACCTTAGGAGGAGGAAAACTTAAGGGGCTTCAAAGAGTTGCTTATATCAACAGCACAGTCTATCCTTTCAGTTCAATACCCCTTCTAATATATTGTCTCCTTCCTGCTGTCTGCCTGCTCACAGACAAGTTCATCACACCATCGATAAGCACCTTTGCAAGTCTTCTCTTTATTGCACTGTTCATCTCAATCTTTGCATCAAGCATACTTGAGTTGAGATGGAGTGGAGTTAGTCTTGAGGAATGGTGGAGAAGTGAACAATTCTGGGTAATAGGCAGCGTCTCAACACATCTCTTTGCAATAGTGAGAAACTTTCTGAAGGGTGTGTCTAAAGTTGATATTAACTTTGGTGTGGTATCAAAAGTACCAGATGATGGAGAATTCCATGATTTGTACACCTTTAGATGGACAGCGCTGCTAATACCTCCAACCACTATCATAATCATCAACCTTGTTGGTATTGTAGCTGGATTTACAGATGCCATAAACAGTGGTGGACATTCTTGGGGAGCATTACTTGGGAAACTCTTCTTCTCCTTCTGGGTTCTCGTCCACCTTTACCCATTCCTTAAAGGTCTGATGGGAAAACAGAACCGAACACCAACCCTTGTCATCATATGGTCAGTGCTTTTGGCTTCTATCTTCTCCTTGCTTTGGGTAAGAATTGATCCTTTTGTGTTGAAAACAAAAGGACCAGACGTTAAGCAGTGTGGAATCAGTTGCTGA 2517 0.4311 MRDEARQPLSRKVAIPSGRLSPYRMMVAARLMILVLFLQYRILHPVPDAVGLWFTSVICEIWLTLSWIIDQIPRWFPIDRETYLDRLSLRFEPENKPNLFPPIDVFVTTVDPIKEPPLVTANTVLSILAMDYPPSKISCYVSDDGASMLTFEALQETAEFARKWVPFCKKYSTEPRAPEKYFSEKIDFLKDKVHSTYVRDRRTMKREYEEFKVRINALVAKSMRVPQEGWTMQDGTPWPGNNTNDHPGMIQILLARSGGLQGNELPCLVYLSREKRPGFQHYSKAGALNALLRVSALLSNAPFVLNLDCNHYVNNSKAVREAMCFFMDLQVGKTICFVQFPLRFDSLDKHDRYANRNTVLFDINLRCLDGIQGPIYIGSGCIFRRKALNGSDPPKTSKRPKMVGCGCCPCFGSRKKLQVHSKHDGNEEDAPAVTGDQNSSYTATTFLFPSFSSTPLFPHLTGTDEDNQLLTSEMNFENKFGKSAVFVSSSITEEGGVPSTSNQAALLKEAIHVMSSSYEDKTLWGYEVGWNYGSISSDILTSFKMHSLGWRSVYCMPKRPAFRGTAPINLSDRLSQVLRWAVGSLEILFSRHCPILYTLGGGKLKGLQRVAYINSTVYPFSSIPLLIYCLLPAVCLLTDKFITPSISTFASLLFIALFISIFASSILELRWSGVSLEEWWRSEQFWVIGSVSTHLFAIVRNFLKGVSKVDINFGVVSKVPDDGEFHDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGGHSWGALLGKLFFSFWVLVHLYPFLKGLMGKQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1589 838 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 805 - -
Prci4g1589 838 Pfam Cellulose synthase 103 832 IPR005150 GO:0016020|GO:0016760|GO:0030244
Prci4g1589 838 SUPERFAMILY Nucleotide-diphospho-sugar transferases 115 661 IPR029044 -
Prci4g1589 838 Coils Coil 201 221 - -
Prci4g1589 838 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 92 190 IPR029044 -
Prci4g1589 838 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 227 392 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1589 Prci-Chr4 13714335 13718711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1589 3 838 Cell Wall Biosynthesis AT5G17420 68.974 0.0 1246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1589 K10999 - gmx:100807219 1254.97