Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1585 ATGGATATGTACATTCGTGTTAAGCGTAGCAAGTCTACATACTTTATCCGATGCAAGCCATCTGATAAAATAATTGACATAAAGCAGAAGTTGCAGGAAATCACTGATCAACCTGTCAATGATCAGCGATTAGTTCTACCAGGTACAGGGGAAATATTAGAGGACTCAGAGACACTTGCAGATCAGAAGGTTGACAATGATGCTGTTGTGGCACTGACACTTAGAAAAGAAAAAGGAATGCAAGAGCAGAAAAGGGGTTGA 261 0.4023 MDMYIRVKRSKSTYFIRCKPSDKIIDIKQKLQEITDQPVNDQRLVLPGTGEILEDSETLADQKVDNDAVVALTLRKEKGMQEQKRG 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1585 86 Gene3D - 1 84 - -
Prci4g1585 86 PANTHER OS03G0364000 PROTEIN 1 78 - -
Prci4g1585 86 Pfam Ubiquitin family 5 76 IPR000626 GO:0005515
Prci4g1585 86 CDD Ubl_ubiquitin_like 5 72 - -
Prci4g1585 86 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Prci4g1585 86 SMART ubq_7 3 75 IPR000626 GO:0005515
Prci4g1585 86 SUPERFAMILY Ubiquitin-like 1 79 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1585 Prci-Chr4 13644417 13647719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1585 1 82 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 31.707 8.03e-06 39.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1585 K03873 - gmx:100499885 137.117