Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1577 ATGAGTTTGAGTGGATTTTGCTTGTTTGTGTTTTTCTCTGTGTTCGTTGTTCATTTAGGAGCTTACGGGCAAGAAAATGCTGACCTGGTGAACGATAAAAGTTCTCTGATATCATTCATGAGAGGCATTGTTTCCGACCCAAATAACGCTCTAGCAAGCTGGAAATCTCCTGATGTTCATGTCTGTAGTTGGTCAGGCATAAGGTGCAACAATGCAAGTGACAGGAGAGTCATAGAGATTAATCTCAACGGAAAATCAGTAGGAGGCACAATTTCTCCTTCTATTTCCAACCTCTCTTCCTTGAAAATTCTTGATCTTTCTGAGAATTTTTTTGTGGGTCACATTCCAAAAGAGTTAGGCTTCTTAACTCAACTTGGGCAACTCAGTTTATCTTGGAATTTTCTTGAAGGAGAAATTCCAGCTGAGTTGAGTTCACTCCATAACTTATACTACCTTGACATGGGAAGCAACAAGCTTGAGGGTGAGATTCCAGCTTCACTTTTCTGCAATGGGTCTTCCTCATTGAGGTATATAGACCTCTCCAACAATTCCTTAGGGGGACAAATCCCATTGAACAATGAGTGTCTGCTTCTAGAGGTTAGGTTTCTCTTACTTTGGTCTAATAAACTAGTAGGCCAAGTTCCTCTTGCTCTTGCCAACTCCAAACAGCTCAAATGGCTTGATTTGGGGTCAAATATGCTGAGTGGAGAGTTACCACTTGAGATTGTAAGTAGTTGGCCGCAGCTACAGTTTCTCTATTTGTCAGATAATGACTTTGTTAGCCATGATGGCAACACCAACCTTGAACCTTTCTTTGCTTCCTTGACAAATTTATCTTACCTTCAAGAACTTGAAATAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTATAATATTGGTGATCTTCCTACAAGCCTTGTACAGCTTCACCTTGATGACAATCTCATTTATGGCCCTATTCCTCCTCAAATAGCCAACCTCGTTAACTTGACTCTCCTAAATTTTTCGAGTAATCAACTGAATGGATCAATCCCTCCTAGCCTATGCAAGATGGGGAAGCTTGAGAGAATCTACTTGTCCAATAATTCACTATCTGGTGAGATTCCTTCAGCACTTGGTGTCATTCAACATCTAGGCCTTCTAGACCTGTCAAGAAACAAGCTTTCTGGTTCTATACCCGATAGTTTTGCTAACCTTTCCCAGTTAAGAAGGCTTCTACTGTATGAAAACCAGCTTTCTGGAACAATTCCACCGAGTCTCGGAAAATGTGTCAATTTGGAGATTTTGGACCTATCTAGAAACAAAATTTCTGGGGTGATTCCTACAGAAGTTGCTGCCTTGACTAGCTTGAAACTACACTTGAACTTATCAAGCAACAACTTGAATGGCCCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGATTTGTCAAACAACAATCTCTCTGGCAGAATCCCACCTCAGCTTGAAAGCTGCATAGCTCTAGAATACCTAAACCTTTCTGGTAACTCCTTAGAGGGCCCTCTCCCTATTTCATTAGGCCAACTGCCTTATTTAAAGGCACTTGATGTCTCTTCAAATAGGTTAACGGGGGCAATACCAGAGTCCCTTCTGTTATCATCCACTCTCAAGAAACTCAATTTCTCCTTCAACAAGTTCTCAGGGAATATACCAAACAAGGAAGCAATTTCATCTCTGAGCATAGACTCTTTCCTAGGAAATGATGCTCTATGTGGTTCCATAAAAGGGATGCAAAGCTGCCACAAGAAACACAGCGATCATTTTGTTCTCCTTATAATTCCAGTGTTTCTATTTGCCATTCCCCTCTTGTGCATGTTTGGCTTCCGATTGGTGCACAGGGTGAAATTTCAAAGGCGACTGGCAATATTTGGCAGAAAGGGCTACAAGAATGATGAAGAGGAAACAAAAGATCTAAAATACCCAAGTATTTCATACAAACAACTTATTGATGCCACTGGAGGCTTCAGTGCTTCAAGCTTAATTGGTTCGGGAAGATTTGGTCATGTCTATAAGGGAGTCCTTGGAGATAACACCAGAATAGCAGTGAAGGTGTTAGACACCACCACAGCAGGTGAATTTTCAGGGAGTTTTAGAAGAGAGATTCAAATTTTGAAAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAGAGTTTAAAGCTCTTGTTCTTCCTCTAATGCCAAATGGCAGCCTTGAGAGGCACCTATATCCGAGCCATGGGTTGAGCCACGCATTGAACTTAGTTCAGGTTGTGAAGATATGTAGTGACGTCGCTGAAGGAATGGCCTATTTGCACCATTACTCTCCAGTGAGAGTGATCCACTGTGATCTCAAGCCGAGCAATATACCTCTTGATGATGATATGACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTTGTGAAAGGTGATGAGAATATGGCCTACAGTAATAACTCAGCATCTTTCAGTTCAACACATGGGTTGTTATGTGGTTCTGTTGGCTATATAGCCCCTGAGTATGGAATGGGGGAAAAAGCATCAACCCAAGGTGACGTGTACAGTTTTGGAGTATTATTACTAGAAATAGTGACAGGTAGGCCACCCACAGATGTTCTTGTTCATGAAGGCTCAAGTTTGCATGAGTGGGTGAAGAGACAGTATCCATACAAGCTAGACAACATTGTTGACAAGGCATTACAGAGGTTGGCCCATTCTGGGCAACATGACAGAAAAATCTGGCAAGATGTTGTGATGGAACTCATAGAACTGAGTCTTCTCTGCACACAACATAATCCTCTAACAAGGCCAAGCATGCTGGATGTGGCTCAGGAAATGGGGAGGCTGAAGGACTACTTGTGTAAACCATCATCTTTGCTAGTTGATGAAGCAGCCAACTCTAAGGTTGATGATTCCTTTTGTAGTGAAAATAACTTACTTGAAAAGTAA 2979 0.4159 MSLSGFCLFVFFSVFVVHLGAYGQENADLVNDKSSLISFMRGIVSDPNNALASWKSPDVHVCSWSGIRCNNASDRRVIEINLNGKSVGGTISPSISNLSSLKILDLSENFFVGHIPKELGFLTQLGQLSLSWNFLEGEIPAELSSLHNLYYLDMGSNKLEGEIPASLFCNGSSSLRYIDLSNNSLGGQIPLNNECLLLEVRFLLLWSNKLVGQVPLALANSKQLKWLDLGSNMLSGELPLEIVSSWPQLQFLYLSDNDFVSHDGNTNLEPFFASLTNLSYLQELEIAENNLGGKLPYNIGDLPTSLVQLHLDDNLIYGPIPPQIANLVNLTLLNFSSNQLNGSIPPSLCKMGKLERIYLSNNSLSGEIPSALGVIQHLGLLDLSRNKLSGSIPDSFANLSQLRRLLLYENQLSGTIPPSLGKCVNLEILDLSRNKISGVIPTEVAALTSLKLHLNLSSNNLNGPLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPISLGQLPYLKALDVSSNRLTGAIPESLLLSSTLKKLNFSFNKFSGNIPNKEAISSLSIDSFLGNDALCGSIKGMQSCHKKHSDHFVLLIIPVFLFAIPLLCMFGFRLVHRVKFQRRLAIFGRKGYKNDEEETKDLKYPSISYKQLIDATGGFSASSLIGSGRFGHVYKGVLGDNTRIAVKVLDTTTAGEFSGSFRREIQILKRTRHRNLIRIITICSKPEFKALVLPLMPNGSLERHLYPSHGLSHALNLVQVVKICSDVAEGMAYLHHYSPVRVIHCDLKPSNIPLDDDMTALVTDFGISRLVKGDENMAYSNNSASFSSTHGLLCGSVGYIAPEYGMGEKASTQGDVYSFGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNIVDKALQRLAHSGQHDRKIWQDVVMELIELSLLCTQHNPLTRPSMLDVAQEMGRLKDYLCKPSSLLVDEAANSKVDDSFCSENNLLEK 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1577 992 Pfam Leucine Rich repeat 423 438 IPR001611 GO:0005515
Prci4g1577 992 Pfam Protein kinase domain 668 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1577 992 Gene3D Transferase(Phosphotransferase) domain 1 743 975 - -
Prci4g1577 992 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Prci4g1577 992 Gene3D Phosphorylase Kinase; domain 1 633 741 - -
Prci4g1577 992 SUPERFAMILY Protein kinase-like (PK-like) 648 954 IPR011009 -
Prci4g1577 992 SMART serkin_6 666 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1577 992 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 353 956 - -
Prci4g1577 992 Pfam Leucine Rich Repeat 353 372 IPR001611 GO:0005515
Prci4g1577 992 Pfam Leucine Rich Repeat 499 518 IPR001611 GO:0005515
Prci4g1577 992 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 743 968 - -
Prci4g1577 992 FunFam Leucine-rich repeat receptor-like protein kinase TDR 275 593 - -
Prci4g1577 992 CDD STKc_IRAK 672 959 - -
Prci4g1577 992 ProSiteProfiles Protein kinase domain profile. 666 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1577 992 Gene3D Ribonuclease Inhibitor 29 197 IPR032675 -
Prci4g1577 992 Gene3D Ribonuclease Inhibitor 266 368 IPR032675 -
Prci4g1577 992 FunFam Leucine-rich repeat receptor-like protein kinase 29 191 - -
Prci4g1577 992 Gene3D Ribonuclease Inhibitor 369 472 IPR032675 -
Prci4g1577 992 Gene3D Ribonuclease Inhibitor 198 265 IPR032675 -
Prci4g1577 992 Gene3D Ribonuclease Inhibitor 473 584 IPR032675 -
Prci4g1577 992 SUPERFAMILY L domain-like 274 573 - -
Prci4g1577 992 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Prci4g1577 992 SUPERFAMILY L domain-like 40 262 - -
Prci4g1577 992 SMART LRR_typ_2 98 122 IPR003591 -
Prci4g1577 992 SMART LRR_typ_2 520 544 IPR003591 -
Prci4g1577 992 SMART LRR_typ_2 375 398 IPR003591 -
Prci4g1577 992 SMART LRR_typ_2 399 423 IPR003591 -
Prci4g1577 992 SMART LRR_typ_2 146 170 IPR003591 -
Prci4g1577 992 SMART LRR_typ_2 327 351 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1577 Prci-Chr4 13563804 13567886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1577 32 967 Receptor kinase-like Gene Family AT3G47570 34.630 4.20e-157 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci4g1577 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1577 - - qsa:O6P43_022222 1414.44