Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1565 ATGTGTATCAGCATTTTCATGCTGTGTTTGTTCCTGAACATAGCATATTCAGACAAGAACTTGAATAAAGTTGGATTCACGTATGATGGATACTTCAAAATGGGGGATCAAGAGCTCAAGCATTCCAATCTGACAGCTAAAGTAATACATGCCGATAGTGGCCTAAGTGAAGCTTGGCAAGTCTTCTACAATCTTCCTCTTCAATTCAAGAATTCCAATACCTCTCCTTCTATCTTCTCTTTCTCTACCACTTTCATCTTTGCAATAGTAGCCACCAATCCTGAGTTTCACGGCCACGGACTCGCCTTCGCTATCTCGCCTACTATAGGTATTCCTCAAGCTCAGCCAAACCAGTATCTTGGCCTATTCAATGCAACGAACGATGGTAAAAGTTATAATCATATTGTAGCAATAGAGCTTGACACTGACGAGGATTTTCAGTTTCATGATATTGATGATAATCATCTTGGAATTGACATCAATGGGTTGGCCTCTGTCAATAGTTCTTCTGCAGGATACTATGCTGATCATGGTCCTCTCAGAAAGCTAGAACTTACAAGTCGAGAACCGATGCAAGTTTGGATTGACTATGACAGTAAGGATCAGAAACTCAGCGTCACAATTCACCCCATAAACATACCTAAACCTGAGATTCCTCTTCTCACACTGATGACAAGAGATCTTTCTTCTAATTTCTCGGAATTTATGTATGTTGGGTTTTCATCCTCTAGCGGGTCATATTCATCTCATTACATATTGGGTTGGAGTTTCCAGATGAACGGTCAAGCTCAGGAGATTAATCTTTCTCGCCTTCCTCACATTCCTGGGATTTTAAATCCAAATGAAAGCGATGGAGGAGGGAAAGGATACGAGAAAGTGTTGATAGTTATATCACCACTAGTAGGGGGTGTGGTTTTCCTTCTAATCTTGATTTATGGCGCGATCATGATCTCGAGGAGGAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAATCTTGTATGGGCCTCATAGGTTCACTTACAAGGACTTGTTCCTTGCAACAAAAGGGTTTAGAGATGGACAACTTCTTGGCAGAGGAGGTTTTGGAAGAGTATACAGAGGAACCCTACCATTTTCCAATGTTCAAATTGCAGTAAAAAGAATTTCTCATGATTCAAGACAAGGAATGAAAGAATTCATAGCAGAAATCGCAACCATCGGCCGTCTCAGGCATCCAAACTTGGTACGACTTCTTGGCTATTGCAGAAGAAAAAATGAACTCCTCTTAATTTATGATTACATGCCCAATGGAAGCCTAGACAAGTTCCTGTACCGCATGCCAAACAGCATACTCAGCTGGAAACAAAGATTCAAGATCATAAAAGATGTGGCATCTGGACTCTTGTATCTTCACCAGCAATGGGTTCAAGTCATCGTCCACAGAGACATCAAACCAGCCAATGTTCTGATTGACAATGACATGAATGCTAGACTGGGAGATTTCGGCCTTGCCAAGCTATGGGACCATGGAAATGATCCTCAAACATCTCGTGTGGTGGGAACTCCGGGCTACATAGACCCAGAGATTGTGCATAGCGGAAAATCAAGCACATTTACTGATATATATTCATTTGGGGTGTTTCTGTTGGAGGTTGCTTGCGGTAGAAGGCCGATCGAAACTCAAACTTCGCCGGAGAAAGTACTGCTGTTAGAATGGGTTATGGTGTGTTTGGATAAGGGAGACATGTGTGAAGCAGTGGACAGCAGATTGGGGGATGAATATGTTGTGGAAGAAGCTGAATTGGTGCTCAAACTTGGATTGCTCTGCTCACACCCTGTCGCTTCAGCTAGGCCTACGATTTCTACTATTGTGCAAATTTTTGATGGCGATTCTCAGTTGCCTGATAACTTATCAGACTTAATGAAGTTTAGAAAAGTTGGAGGCTGGTCAGGTCAAGGATGTGCTTCATCATACTCTACCATTCCTACTGGTCAGACTTCTATTGCTTCTATCACTTTTACAGAACCATTTGCCTCTCACGGCCGCTAG 2031 0.4215 MCISIFMLCLFLNIAYSDKNLNKVGFTYDGYFKMGDQELKHSNLTAKVIHADSGLSEAWQVFYNLPLQFKNSNTSPSIFSFSTTFIFAIVATNPEFHGHGLAFAISPTIGIPQAQPNQYLGLFNATNDGKSYNHIVAIELDTDEDFQFHDIDDNHLGIDINGLASVNSSSAGYYADHGPLRKLELTSREPMQVWIDYDSKDQKLSVTIHPINIPKPEIPLLTLMTRDLSSNFSEFMYVGFSSSSGSYSSHYILGWSFQMNGQAQEINLSRLPHIPGILNPNESDGGGKGYEKVLIVISPLVGGVVFLLILIYGAIMISRRRKFIQVLEDWQILYGPHRFTYKDLFLATKGFRDGQLLGRGGFGRVYRGTLPFSNVQIAVKRISHDSRQGMKEFIAEIATIGRLRHPNLVRLLGYCRRKNELLLIYDYMPNGSLDKFLYRMPNSILSWKQRFKIIKDVASGLLYLHQQWVQVIVHRDIKPANVLIDNDMNARLGDFGLAKLWDHGNDPQTSRVVGTPGYIDPEIVHSGKSSTFTDIYSFGVFLLEVACGRRPIETQTSPEKVLLLEWVMVCLDKGDMCEAVDSRLGDEYVVEEAELVLKLGLLCSHPVASARPTISTIVQIFDGDSQLPDNLSDLMKFRKVGGWSGQGCASSYSTIPTGQTSIASITFTEPFASHGR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1565 676 FunFam L-type lectin-domain containing receptor kinase S.4 428 634 - -
Prci4g1565 676 PANTHER - 46 625 - -
Prci4g1565 676 Gene3D Transferase(Phosphotransferase) domain 1 428 636 - -
Prci4g1565 676 CDD STKc_IRAK 357 623 - -
Prci4g1565 676 Pfam Legume lectin domain 26 271 IPR001220 GO:0030246
Prci4g1565 676 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Prci4g1565 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 264 IPR013320 -
Prci4g1565 676 SUPERFAMILY Protein kinase-like (PK-like) 333 629 IPR011009 -
Prci4g1565 676 SMART serkin_6 351 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1565 676 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1565 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Prci4g1565 676 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Prci4g1565 676 FunFam Lectin-domain containing receptor kinase A4.3 336 427 - -
Prci4g1565 676 Gene3D - 14 272 - -
Prci4g1565 676 FunFam L-type lectin-domain containing receptor kinase V.9 24 262 - -
Prci4g1565 676 Pfam Protein kinase domain 352 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1565 676 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1565 Prci-Chr4 13244257 13246287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1565 60 676 Receptor kinase-like Gene Family AT4G29050 56.180 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci4g1565 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1565 - - pcin:129301411 1207.2