Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1564 ATGTCTATCACCATTTTCATGCTGTGTTTGTTCCTGAACATAGCATATTCAGACACGAACATGAATAATGTTGGATTCACGTATGATGGATACTTCAAGATGGGCGATCAAGAGCTCAAGCATTCCAATCTGACGGCTAAAGTAATACGCACTGATGGCGGCCGAAGTGAAGCTTGGCAAGTCTTTTACAATCTTCCCCTTCAATTCAAGAATTCCAATGCCTCTCCTTCTATCTTCTCCTTCTCTACCACTTTCGTCTTTGCAATAGTAGCCACCAATCCTGAATTTCACGGCCACGGACTCGCCTTCGCTATCTCGCCTACCAGAGGTATTCCTCAAGCTCAGCCAAACCAGTATCTTGGCCTATTCAATGCTACCAACAATGGTGAAAGTTATAATCATATTGTTGCAATAGAGCTTGACACTGACAAGGATTTTCAGTTAAATGATATTGATGATAATCATCTTGGAATTGACATCAATGGGGTGGCCTCTGTCAATAGTTCTCCTGCAGGATACTATGCTGATCATGGTCCTCTCAGAAAGCTAAAACTTACAAGTAGAGAACCGATGCAAGTTTGGATTGACTATGACAGTAAAGATCAGAAACTCAGCGTCACAATTTATCCCATAAACATACCTAAACCAGAGATTCCTCTTCTCACACTGATGACAAGAGATCTTTCTTCTAATTTCTCTGAATTTATGTATGTTGGGTTCTCATCCTCCAGCGGGTCATATTCATCTCATTACATACTAGGTTGGAGTTTCCAGATGAACGGTCAAGCTAAGGAGATTAATCTTTCTCGCCTTCCTGACATTCCTGGGATTTTAGATCCAAATGAAAGCGATGGAGGAGGGATAGGATACAAGAAAGTTTTGATAGTTATGTTACCACTACTAGTAGGTGTGGTTTTCCTTCTAATCTTGATTTATGGAGCGATCATGATCTCGAGGAGGAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAGTCTTGTATGGGCCTCATAGGTTCACTTACAAAGACTTGTTCATTGCAACAAAAGGGTTTAGAGATGGACAACTTCTTGGCAGAGGAGGTTTTGGAAGAGTATACAAAGGGACTCTACCATTTTCCAATGTTCAAATTGCAGTGAAAAGAGTTTCTCATGATTCAAGACAAGGAATGAAAGAATTCATAGCAGAAATCGCAACCATCGGCCGTCTCAGGCATCCAAACTTGGTAAGGCTTCTTGGCTATTGCAGAAGAAAAAAAGAACTCCTCTTAATTTATGACTACATGCCCAATGGAAGCCTAGACAAGTTCCTCTACCGCATGCCAAACAGCATACTCAGCTGGAAACAAAGATTCAAGATCATAAAAGATGTGGCATCTGGACTCTTGTATCTTCACCACCAATGGGTTCAAGTCATCGTCCACAGAGACATCAAACCAGCCAATGTTCTGATTGACAATGACATGAATGCTAGACTGGGAGATTTTGGCCTTGCCAAGCTATGGGACCATGGAAATGATCCTCAAACATCTCATGTGGTGGGAACTCCGGGCTACATAGACCCAGAAATTGTGCATAGTGGAAAATCAAGCACATTTACTGATATATATTCATTTGGGGTGTCTCTGCTGGAGATTGCCAGCGGTAGAAGGCCGGTCGAAACTGATGAAACTTCGCCGGAGAAAGTATTGCTGTTAGAATGGGTCAAGGTGTGTTGGGATAAGGGAAACTTATGTGAAGTAGTGGATAGCAAATTGGGGGATGAATATGTGGTGGAAGAAGCTGAAATGGTGCTCAAACTAGGGTTGCTGTGTTCACACCCTGTTGCTTCGGCTAGGCCTACGATTTCTACTATTGTGGAAATTTTGGATGGAGATTCTCAGTTTCCTGATAACTTATCAGACTTGATCAAGTTTAGAAATTTTGGTGGCTGGTCTGGTCAAGGATCTTCATCGTCCTCTACTTTTCCCACTGGGCAGACTTCTATTGCTTCTCTCACTTTCACCGAGCCATTTGCCTCCAGGGGCCGCTAG 2031 0.4234 MSITIFMLCLFLNIAYSDTNMNNVGFTYDGYFKMGDQELKHSNLTAKVIRTDGGRSEAWQVFYNLPLQFKNSNASPSIFSFSTTFVFAIVATNPEFHGHGLAFAISPTRGIPQAQPNQYLGLFNATNNGESYNHIVAIELDTDKDFQLNDIDDNHLGIDINGVASVNSSPAGYYADHGPLRKLKLTSREPMQVWIDYDSKDQKLSVTIYPINIPKPEIPLLTLMTRDLSSNFSEFMYVGFSSSSGSYSSHYILGWSFQMNGQAKEINLSRLPDIPGILDPNESDGGGIGYKKVLIVMLPLLVGVVFLLILIYGAIMISRRRKFIQVLEDWQVLYGPHRFTYKDLFIATKGFRDGQLLGRGGFGRVYKGTLPFSNVQIAVKRVSHDSRQGMKEFIAEIATIGRLRHPNLVRLLGYCRRKKELLLIYDYMPNGSLDKFLYRMPNSILSWKQRFKIIKDVASGLLYLHHQWVQVIVHRDIKPANVLIDNDMNARLGDFGLAKLWDHGNDPQTSHVVGTPGYIDPEIVHSGKSSTFTDIYSFGVSLLEIASGRRPVETDETSPEKVLLLEWVKVCWDKGNLCEVVDSKLGDEYVVEEAEMVLKLGLLCSHPVASARPTISTIVEILDGDSQFPDNLSDLIKFRNFGGWSGQGSSSSSTFPTGQTSIASLTFTEPFASRGR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1564 676 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Prci4g1564 676 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Prci4g1564 676 FunFam L-type lectin-domain containing receptor kinase V.9 23 262 - -
Prci4g1564 676 FunFam Lectin-domain containing receptor kinase A4.3 336 427 - -
Prci4g1564 676 Gene3D Transferase(Phosphotransferase) domain 1 428 636 - -
Prci4g1564 676 Pfam Legume lectin domain 26 271 IPR001220 GO:0030246
Prci4g1564 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Prci4g1564 676 Gene3D - 13 272 - -
Prci4g1564 676 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Prci4g1564 676 Pfam Protein kinase domain 352 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1564 676 FunFam L-type lectin-domain containing receptor kinase S.4 428 635 - -
Prci4g1564 676 PANTHER - 46 626 - -
Prci4g1564 676 CDD STKc_IRAK 357 624 - -
Prci4g1564 676 SUPERFAMILY Protein kinase-like (PK-like) 333 625 IPR011009 -
Prci4g1564 676 ProSiteProfiles Protein kinase domain profile. 351 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1564 676 SMART serkin_6 351 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1564 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 10 264 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1564 Prci-Chr4 13192195 13194843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1564 60 676 Receptor kinase-like Gene Family AT4G29050 56.752 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci4g1564 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1564 - - pcin:129301411 1152.5