Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1562 ATGGCTTTCAATTCGGTCGTTCTGCTTCTTCTCTTCTTCCTCTCCTGCGCTGGACTTTGTTTCTCTTCCGAGCCTCGCAACCACGAAGTGGAGGCTTTGATGAGCATAAAGAATGCTCTGACTGACCCGCATGGAGTTTTAAGCAACTGGGATGAGTACTCTGTGGACCCTTGCAGTTGGGCTATGATCACATGTTCTCCTGATTCCCTTGTCATAGGCCTGGGAGCTCCTAGCCAATCTCTTTCAGGAACTCTATCAGGAGCAATCGCAAATCTGACAAATCTTCGGCAAGTTTTACTGCAGAACAACAATATCTCCGGCAAAATCCCACAGGAGCTTGGTAACCTTGCAAAGCTTCAGACTCTTGATCTTTCCAATAATCGATTCTCTGGGCCCATTCCAGTGTCTTTGAGTTGGTTGAATAATCTCCAGTACCTGAGGCTGAACAACAACAGTCTGTCTGGGCCATTTCCTGTATCACTGTCCAAAATCCCACAGCTTTCTTTCTTGGACTTGTCTTACAACAATCTCAGCGGACCATTACCCAAGTCTCCGGCCAGAACATTCAACGTTATTGGAAACCCCTTAATTTGTGGAAGCAGTTCTACTGAAGGCTGCTATAGATCAGCAACCCTCACACCTGTTCCTTTCACTCTAATATTGTCACGAGGAAATCACAAGTCCGAGAAGCTTGCAATTGCACTTGGGGTCAGTCTCAGCTTTGCTAGCATCATACTTGTGTCTTTTGGGATCTTTTGGTACAGGAAGAGACGGCAGAGCAAAGCCATTCTGTACCTCAATGATTATCAAGAAGCGGGACTTGTTAGCTTGGGAAATCTCAAAAATTTTACTTTCAGAGAGCTCCAACATGCAACAGACAATTTCAGCTCCAGGAACATACTTGGAGCAGGAGGTTTTGGCAATGTTTATCGGGGGAGGCTTGGAGATGGGACAATGGTGGCAGTGAAAAGGCTGCATGATGTATGTGGAATTGCTGGTGAATCACAGTTTCAAACAGAACTGGAGATGATCAGCTTGGCAGTTCACCGTAATTTACTTCGCTTGATAGGATTTTGTGCCATTCCTAATGAAAAGCTTCTGGTTTACCCTTATATGTCTAACGGTAGTGTGGCTTCCAGGCTCAGAGGCAAACCTTCTTTGGACTGGAACACAAGAAAGAGGATTGCCATTGGAGCTGCTAGAGGTCTTCTGTATCTTCATGAACAATGCGATCCGAAGATAATACACAGAGATGTAAAGGCTGCTAATGTGCTTCTAGATGACTATTTTGAGGCTGTTGTTGGTGATTTTGGGCTTGCAAAGCTCCTTGACCATGCTGACTCTCATGTCACAACTGCTGTCCGTGGCACTGTTGGCCACATTGCACCAGAATATCTTTCCACTGGCCAATCTTCTGAGAAAACTGATGTATTTGGATTTGGCATTCTCTTGTTGGAGCTTATAACTGGAATGACAGCCCTTGAGTTTGGGAAAACAGTTAATCAAAAGGGTGCTATCCTAGAGTGGGTCAAGAAAATACAACAAGAAAAGAAACTTGAAGTATTGGTGGACAAAGAGTTAGGTAGTCACTATGACTGGATAGAGGTGGGGGAAATGTTACAAGTAGCTTTACTCTGCACTCAATATTTGCCGGCCCACCGCCCTAAAATGTCTGAAGTGGTCCGGATGCTCGAAGGCGATGGCCTTGCTGAGAAATGGGCAGCATCACATAATCATGGTAGCCTTAGCATGAGCTCCTTTCACAGCAACAGTAGCAACAGCTCATCATTCCGCCCGACCACCAACCCATCAAATTCAAAACACCATGACAATGTTCATGATCGTTCCTACATGTTTGGCATGGCCGTGGATGACGACGACGACGGACGTTCTTTGGATTCCGATGCCATGGAACTCTCTGGTCCAAGATGA 1932 0.456 MAFNSVVLLLLFFLSCAGLCFSSEPRNHEVEALMSIKNALTDPHGVLSNWDEYSVDPCSWAMITCSPDSLVIGLGAPSQSLSGTLSGAIANLTNLRQVLLQNNNISGKIPQELGNLAKLQTLDLSNNRFSGPIPVSLSWLNNLQYLRLNNNSLSGPFPVSLSKIPQLSFLDLSYNNLSGPLPKSPARTFNVIGNPLICGSSSTEGCYRSATLTPVPFTLILSRGNHKSEKLAIALGVSLSFASIILVSFGIFWYRKRRQSKAILYLNDYQEAGLVSLGNLKNFTFRELQHATDNFSSRNILGAGGFGNVYRGRLGDGTMVAVKRLHDVCGIAGESQFQTELEMISLAVHRNLLRLIGFCAIPNEKLLVYPYMSNGSVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYFEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAILEWVKKIQQEKKLEVLVDKELGSHYDWIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHNHGSLSMSSFHSNSSNSSSFRPTTNPSNSKHHDNVHDRSYMFGMAVDDDDDGRSLDSDAMELSGPR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1562 643 Gene3D Phosphorylase Kinase; domain 1 266 371 - -
Prci4g1562 643 MobiDBLite consensus disorder prediction 584 643 - -
Prci4g1562 643 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Prci4g1562 643 Pfam Protein tyrosine and serine/threonine kinase 298 564 IPR001245 GO:0004672|GO:0006468
Prci4g1562 643 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1562 643 MobiDBLite consensus disorder prediction 584 606 - -
Prci4g1562 643 FunFam Somatic embryogenesis receptor-like kinase 1 372 584 - -
Prci4g1562 643 Gene3D Ribonuclease Inhibitor 26 208 IPR032675 -
Prci4g1562 643 FunFam Putative LRR receptor-like serine/threonine-protein kinase 26 208 - -
Prci4g1562 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Prci4g1562 643 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Prci4g1562 643 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 575 - -
Prci4g1562 643 FunFam Somatic embryogenesis receptor kinase 1 265 371 - -
Prci4g1562 643 Gene3D Transferase(Phosphotransferase) domain 1 372 583 - -
Prci4g1562 643 PRINTS Leucine-rich repeat signature 164 177 - -
Prci4g1562 643 PRINTS Leucine-rich repeat signature 119 132 - -
Prci4g1562 643 SMART serkin_6 295 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1562 643 SUPERFAMILY L domain-like 26 191 - -
Prci4g1562 643 SUPERFAMILY Protein kinase-like (PK-like) 278 565 IPR011009 -
Prci4g1562 643 MobiDBLite consensus disorder prediction 607 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1562 Prci-Chr4 13092957 13098764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1562 8 643 Receptor kinase-like Gene Family AT5G16000 63.820 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci4g1562 PK_Tyr_Ser-Thr 9.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1562 - - gmx:100797186 983.015