Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1539 ATGAAAAAGGCCAGCTCAGAGAAGCTAGAATTTCTCCAGAAATGGATGGAGGGTATGGAGAAATGTAAGTCTCTGAAGAAGAACATGAGCTTGTCGGAGAGGAAGAAGACCATAAAAGTGTCAGCAGATTTAGCGATGGCTTGCAGCAGAACTGAAACCAAGTGTTGGAGCCGAGCCCTTATTGCCAATATTGCTTCGAGAGACCACAACAGCAAAGTCCTGACGCAGCACGTAATAGGGTCCTCATCATCACTGTGCTTCAGCCTAACAAAGCCTTACACTTCTTCTTCTTCTTCTTCTTCACTGGTTAGGAACAAGAGGACACTACTTAACAGCAGCAGGAAGATCATGAAGAGAAGGAGCCGTACAGTCCGTAGTGGAGCGAAGAAGAAGAAAACAGCTATGGCGGATTCCATTGCAAGGAAGCTTGTCCAAAAGAGAAGAGAAAAGCTTAAGAGGCTTGTTCCAGGTGGAGATCTTATGGACGATGATGTGACCTTGATTGAAGAAACCCTAGATTACATTCAATCCCTCCGATCTCAAGTTCAAGTAATGCGTCGTCTTCTCACTACCTCTCAGCTCATGAAATGTTCCTAA 597 0.4489 MKKASSEKLEFLQKWMEGMEKCKSLKKNMSLSERKKTIKVSADLAMACSRTETKCWSRALIANIASRDHNSKVLTQHVIGSSSSLCFSLTKPYTSSSSSSSLVRNKRTLLNSSRKIMKRRSRTVRSGAKKKKTAMADSIARKLVQKRREKLKRLVPGGDLMDDDVTLIEETLDYIQSLRSQVQVMRRLLTTSQLMKCS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1539 198 CDD bHLH_AtIBH1_like 144 189 IPR044549 GO:0006355
Prci4g1539 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 188 IPR036638 GO:0046983
Prci4g1539 198 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 9 189 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1539 Prci-Chr4 12836824 12837886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1539 1 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 37.824 3.40e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1539 - - pcin:129309973 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1539 4 12836824 12837886 Prci4g1539 4 12836824 12837886 ECH