Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1535 ATGGCCCTCAAATTGAATGTCGTGCTTGTCATATCTTTGGCCATCGCAAGTCTTGTCTACGTAGCATCTGCCTCTTCCGGCACCGCCACATTTTACACTAAATTACGCCCATCTGCATGCTTTGAAAGCCATGACGAGGGAACAATGGTGGCAGCGGCGAGCGACTCTATCTGGGACCATGGAAAAGCATGTGGAAGAAAGTACAGAGTGAGGTACACCGGTGGTACCAGCGGCGGTCTGGCTCACCCTTGCCGGAGCAGAACCGTCACCGTCAAGATTGTCGATTTCTGCCCGAGATGCCAAGGAACCATCGATCTCTCTCATCAAGCTTTCTCTGCCATCGCTGACCCTGTCGAAGGAAAAATCCGCATTGACTTCACCCAGTAA 387 0.5194 MALKLNVVLVISLAIASLVYVASASSGTATFYTKLRPSACFESHDEGTMVAAASDSIWDHGKACGRKYRVRYTGGTSGGLAHPCRSRTVTVKIVDFCPRCQGTIDLSHQAFSAIADPVEGKIRIDFTQ 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1535 128 CDD DPBB_EG45-like 26 127 - -
Prci4g1535 128 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 128 IPR007112 -
Prci4g1535 128 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 128 IPR044206 GO:0009627|GO:0048046
Prci4g1535 128 Gene3D - 24 128 IPR036908 -
Prci4g1535 128 FunFam Barwin-related endoglucanase 24 128 - -
Prci4g1535 128 SUPERFAMILY Barwin-like endoglucanases 14 127 IPR036908 -
Prci4g1535 128 Pfam Lytic transglycolase 51 125 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1535 Prci-Chr4 12774772 12775722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1535 49 128 Expansin Gene Family AT2G45110 34.409 9.25e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1535 - - pcin:129308842 144.436