Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1533 ATGAAGCTAATTGCCATCGCAAGCCTCGTCTCAGTGGCATCAGCCGCTTCTGGAACTGCCACCTTTTACAATGTATATGTTCCATCTGCATGCTATGGATACCAAGACAAGGGAACTATGATAGCAGCAGCGGGTGACTCGATCTGGAACAACGGAGCTGCATGTGGAAGAAGGTACAGGGAGGTGACTGGTGCTACCAACCAAGGTGTGCCTCAACCTTGCCGAAGTGGAACTGTCACCGTCACGATTGTCGATCGCTGCCCTTCTCCGGGATGCCATGCCACCATTGATCTCTCCCAAGAAGCTTTCTCTAAAATTGCTAACCCTGACGCGGGAAAAATCAAAATTGAATACACCCCGTAA 363 0.5014 MKLIAIASLVSVASAASGTATFYNVYVPSACYGYQDKGTMIAAAGDSIWNNGAACGRRYRVXVTGATNQGVPQPCRSGTVTVTIVDRCPSPGCHATIDLSQEAFSKIANPDAGKIKIEYTP 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1533 121 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 120 IPR044206 GO:0009627|GO:0048046
Prci4g1533 121 FunFam Barwin-related endoglucanase 15 121 - -
Prci4g1533 121 SMART dpbb_1 41 119 IPR007112 -
Prci4g1533 121 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 14 121 IPR007112 -
Prci4g1533 121 SUPERFAMILY Barwin-like endoglucanases 6 120 IPR036908 -
Prci4g1533 121 Pfam Lytic transglycolase 42 119 IPR009009 -
Prci4g1533 121 CDD DPBB_EG45-like 16 120 - -
Prci4g1533 121 Gene3D - 15 120 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1533 Prci-Chr4 12734762 12735450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1533 40 119 Expansin Gene Family AT2G45110 37.363 1.65e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1533 - - csin:114316656 183.341