Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1532 ATGGCTCTCGAAATGAAAGCAGTGTTGGCAATGGTGCTTGCCCTCTCGAGCTTTGTCTCACTGTCTACATCTGCCATTCCTGGAACCGCCACCTTTTACACTCAATACGTTCCATCTGCGTGCTTTGGATATGAAGATGAAGGAACAATGATAGCAGCAGCAAGCGACTCACTCTGGAACGACGGAGCAGTCTGTGGAAGAATGTTCAGAATCACGTGCACTGGTGGCACCGCCACCGACAATGGGGCGGCTCAGCCGTGTAAAGGAGGAAGCATCACTGTCAAGATCGTCGATCGCTGCCCTTCTACGGCATGCCACGCAACCTTGTATCTCTCTCAGCAAGCCTTCTCCGCCATTGCTGACCCTGTCCAAGGCGAAATCAACATTGACTACACCCCGTAA 402 0.5224 MALEMKAVLAMVLALSSFVSLSTSAIPGTATFYTQYVPSACFGYEDEGTMIAAASDSLWNDGAVCGRMFRITCTGGTATDNGAAQPCKGGSITVKIVDRCPSTACHATLYLSQQAFSAIADPVQGEINIDYTP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1532 133 Pfam Lytic transglycolase 52 131 IPR009009 -
Prci4g1532 133 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 133 IPR007112 -
Prci4g1532 133 FunFam Barwin-related endoglucanase 25 133 - -
Prci4g1532 133 SMART dpbb_1 51 131 IPR007112 -
Prci4g1532 133 CDD DPBB_EG45-like 26 132 - -
Prci4g1532 133 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 132 IPR044206 GO:0009627|GO:0048046
Prci4g1532 133 Gene3D - 11 133 IPR036908 -
Prci4g1532 133 SUPERFAMILY Barwin-like endoglucanases 24 132 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1532 Prci-Chr4 12710537 12716350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1532 50 131 Expansin Gene Family AT2G45110 33.696 5.85e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1532 - - pcin:129308842 270.781