Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1531 ATGGCTCTCGAAATGAAATCAGCGTTAGCAATGGTCCTTGCCCTCTTGAGTTTCGTCTCAATGACATCTGCTATTCCTGGAACTGCCACCTTTTATACTCAATACGTTCCATCTGCATGCTATGGAAATGAAGATGAAGGAACAAGGATAGCAGCAGCAAGTGACACCTTGTGGGACAACGGAGGTGCATGTGGAAGAATGTACAGAGTCATGTGCACTCGTGGCACCGGCGACTACGGGGCGGCTCAGCCGTGCAAGGGAGGAAGCGTCACCGTCAAGATCGTTGATCGCTGCCCATCTACGTCATGCCATGCCACCTTGGACCTCTCTCAGGAAGCCTTCTCCGACATCGCTGACCCTGTCCAAGGCAAAATCAACATTGATTACACCCAGTAA 396 0.5101 MALEMKSALAMVLALLSFVSMTSAIPGTATFYTQYVPSACYGNEDEGTRIAAASDTLWDNGGACGRMYRVMCTRGTGDYGAAQPCKGGSVTVKIVDRCPSTSCHATLDLSQEAFSDIADPVQGKINIDYTQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1531 131 Gene3D - 23 131 IPR036908 -
Prci4g1531 131 SUPERFAMILY Barwin-like endoglucanases 13 131 IPR036908 -
Prci4g1531 131 SMART dpbb_1 50 129 IPR007112 -
Prci4g1531 131 FunFam Barwin-related endoglucanase 24 131 - -
Prci4g1531 131 Pfam Lytic transglycolase 51 129 IPR009009 -
Prci4g1531 131 CDD DPBB_EG45-like 25 130 - -
Prci4g1531 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 131 IPR044206 GO:0009627|GO:0048046
Prci4g1531 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 131 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1531 Prci-Chr4 12704980 12706045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1531 50 131 Expansin Gene Family AT2G45110 30.435 2.38e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1531 - - pcin:129308842 212.616