Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1527 ATGCTTTCGAGATCTTGCATAGACCTATTGAGTTTGGTTTCCGTCGATGATTATCGAGCACTGTATCAGATTCCGAGAGTCTCAACGGTGCCGGGAGTGGTGTCAAAATTTGAGGCCGCCGAAGACGACCACGCCGATTACGGGTCCGGATTCGACGGCATCGTTTCGTCCTTACCGCAGGAGCGCAGGATCATAGTGGCGAACCAGTTGCCGATACGGGCTTCTCGGGATGTGAGCACCAAGAAATGGAGTTTCGAATTCGATAGTGATAGTTTGGTGCTGCAGCTCAAAGACGGGTTACCCTCCGACGTCGACGTTTTGTACGTTGGCTCCTTGAAGGACGAGATCGACCCGTCGGAACAAGACGAAGTGGCGCAGGTTTTGCTCGAGAAGTTTCGGTGCGTGCCAACCTTCTTGCCCTCTGAAATTCACAATAAGTACTACCATGGCTTCTGCAAGCATTATCTCTGGCCTCTGTTTCATTACATGGTGCCCATGTCGACGAGCCAAGGTGCGCGTTTCGATCGCTCGCAGTGGCAAGCTTATGTTTTGGCCAACAGAATCTTCGCTAACAAGGTAACGGAGGTGATCAACCCGGACGAGGATTTTGTTTGGGTCCATGATTATCATCTCATGATCTTGCCTACACTACTGAGGAAACGGTTCCACCGCGTTAAGCTTGGATTCTTTATGCACAACACATTCCCGTCTTCAGAAATCTATAGAACTATACCTGTTCGTGATGATCTCCTTCGGGCCTTGTTGAATTGTGATTTAATTGGATTCCATACCTTTGATTACGCCAGACATTTCTTGTCCTGTTGTAGCCGGATGTTCGGTTTGGATTATGAGTCTAAGAGGGGTTACATGGGACTAGATTATTACGGTCGAACCGTGATGATTAAGATCCTGCCGGCCGGAATCCACATGGGTCAGCTCGAATCGGTGTTTTCGTTGTCGGAGACGGCTGAAAAGATTAAGGAATTGAAGAAACGATTTGAGGGGAAATTTGTGATTCTGGGTGTGGACGACATGGATTTGTTCAAAGGTATCAACTTTAAGTTTTTAGCAATGGGGCAACTCTTGGATATACACGAGGAGCTAAGGGGTCGAGTTGTTTTAGTCCAGATTCTGAATCCTGCTAGGAGCGAAGGTAAAGACATTCAGGATGTGCAAAAAGAGACCAATGCGATTGCCAAGGAAGTCAATGAGAAATACGGCGAGCCAGGTTACCAGCCAATCATCTTCATCAATGGTCCTGTTTCAACACTCGAGAAAGCTGCCTACTGTGCCATTTCTGACTGCTGCGTTGTGAATGCCGTGAGAGATGGGATGAACTTGGTGCCTTATATGTACACTGTTTGCAGACAGGGCAGCCCGGCGTTGGACAAATCACTTGAAGAAGATGACGACAAGGATTCTAAAAAACCCAAAGAGAGTGTTATCATCGTCTCTGAATTCATCGGATGCTCGCCGTCTCTGAGCGGTGCGATCCGAGTGAACCCGTGGAACGTCGATGAGGTCTCTGAGGCCATGAATTTGGCGATCACATTGCCAGAGGCAGAGAAGAATTTACGTCATGAAAAGCATTATAAGTATATCAGCTCTCACGATGTAACTTATTGGGCTCGAAGTTTTGATCGAGACTTGGAGAGAGCATGCAGAGAACATTACCTCAAGAGGTATTGGGGCGTTGGTCTTGGCTTGGGATTCAGAATTGTGGCTTTGGATCCGACATTCAGGAAGCTTTCAGTGGATAACATTGCATCAGCTTATAAAAACACACACAGTCGTTTGATCCTTCTGGACTATGATGGTACCATGTTGCCGCAGTCATCCATGGACAAGACTCCAAGCAACGAGGTTATTTCTGTCTTGAATTGTCTGTGCAGTGATCCCAACAACACAGTGTTCATTGTGAGTGGAAGAGATAAGAAGTGCCTAAGCAAGTGGTTTTCTCCATGTGAGAAGCTTGGTCTCTCAGCTGAGCATGGTTACTTCACCAGGTGGAGTAAGGATTCTACTTGGGAGACATGTGGGTTGACAATGGACTTTGATTGGAAAAAGATTGCGGAACCAGTCATGGCTCTTTACACAGAAGCAACCGATGGGTCTTTCATTGAACAAAAGGAAAGCGCACTGGTTTGGCATCATCAAGAAGCTGACCCTCACTTTGGATCATCCCAAGCCAAAGAGCTTCTTGATCACCTCGAGAGTGTTCTTGCTAATGAACCAGTCATTGTTAAAAGAGGGCAACATATCGTGGAAGTAAATCCTCAGGTACGAATCATATTGGTGTGA 2301 0.4685 MLSRSCIDLLSLVSVDDYRALYQIPRVSTVPGVVSKFEAAEDDHADYGSGFDGIVSSLPQERRIIVANQLPIRASRDVSTKKWSFEFDSDSLVLQLKDGLPSDVDVLYVGSLKDEIDPSEQDEVAQVLLEKFRCVPTFLPSEIHNKYYHGFCKHYLWPLFHYMVPMSTSQGARFDRSQWQAYVLANRIFANKVTEVINPDEDFVWVHDYHLMILPTLLRKRFHRVKLGFFMHNTFPSSEIYRTIPVRDDLLRALLNCDLIGFHTFDYARHFLSCCSRMFGLDYESKRGYMGLDYYGRTVMIKILPAGIHMGQLESVFSLSETAEKIKELKKRFEGKFVILGVDDMDLFKGINFKFLAMGQLLDIHEELRGRVVLVQILNPARSEGKDIQDVQKETNAIAKEVNEKYGEPGYQPIIFINGPVSTLEKAAYCAISDCCVVNAVRDGMNLVPYMYTVCRQGSPALDKSLEEDDDKDSKKPKESVIIVSEFIGCSPSLSGAIRVNPWNVDEVSEAMNLAITLPEAEKNLRHEKHYKYISSHDVTYWARSFDRDLERACREHYLKRYWGVGLGLGFRIVALDPTFRKLSVDNIASAYKNTHSRLILLDYDGTMLPQSSMDKTPSNEVISVLNCLCSDPNNTVFIVSGRDKKCLSKWFSPCEKLGLSAEHGYFTRWSKDSTWETCGLTMDFDWKKIAEPVMALYTEATDGSFIEQKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVIVKRGQHIVEVNPQVRIILV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1527 766 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 555 - -
Prci4g1527 766 NCBIfam trehalose-phosphatase 597 760 IPR003337 GO:0003824|GO:0005992
Prci4g1527 766 CDD GT20_TPS 62 551 IPR001830 GO:0003824|GO:0005992
Prci4g1527 766 Gene3D - 600 679 IPR023214 -
Prci4g1527 766 Gene3D - 681 760 - -
Prci4g1527 766 Pfam Trehalose-phosphatase 601 761 IPR003337 GO:0003824|GO:0005992
Prci4g1527 766 FunFam Trehalose-6-phosphate synthase 2 681 760 - -
Prci4g1527 766 Gene3D Glycogen Phosphorylase B; 56 315 - -
Prci4g1527 766 Gene3D Glycogen Phosphorylase B; 316 535 - -
Prci4g1527 766 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Prci4g1527 766 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 761 IPR001830 GO:0003824|GO:0005992
Prci4g1527 766 SUPERFAMILY HAD-like 598 760 IPR036412 -
Prci4g1527 766 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 597 714 - -
Prci4g1527 766 FunFam Alpha,alpha-trehalose-phosphate synthase 316 535 - -
Prci4g1527 766 Pfam Glycosyltransferase family 20 62 551 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1527 Prci-Chr4 12653799 12656647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1527 1 760 Trehalose Biosynthesis Gene Families AT2G18700 66.623 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1527 K16055 - qsa:O6P43_002917 1275