Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1525 ATGCTTTCGAGATCTTGCATAGACCTATTGAGTTTGGTTTCCGTCGATGATTATCGAGCACTGTATCAGATTCCGAGAGTCTCAACGGTGCCGGGAGTGGTGTCAAAATTTGAGGCCGCCGAAGACGACCACGCCGATTACGGGTCCGGATTCGACGGCATCGTTTCGTCCTTACCGCAGGAGCGCAGGATCATAGTGGCGAACCAGTTGCCGATACGGGCTTCTCGGGATGTGAGCACCAAGAAATGGAGTTTCGAATTCGATAGTGATAGTTTGGTGCTGCAGCTCAAAGACGGGTTACCCTCCGACGTCGACGTTTTGTACGTTGGCTCCTTGAAGGACGAGATCGACCCGTCGGAACAAGACGAAGTGGCGCAGGTTTTGCTCGAGAAGTTTCGGTGCGTGCCAACCTTCTTGCCCTCTGAAATTCACAATAAGTACTACCATGGCTTCTGCAAGCATTATCTCTGGCCTCTGTTTCATTACATGGTGCCCATGTCGACGAGCCAAGGTGCGCGTTTCGATCGCTCGCAGTGGCAAGCTTATGTTTTGGCCAACAGAATCTTCGCTAACAAGGTAACGGAGGTGATCAACCCGGACGAGGATTTTGTTTGGGTCCATGATTATCATCTCATGATCTTGCCTACACTACTGAGGAAACGGTTCCACCGCGTTAAGCTTGGATTCTTTATGCACAACACATTCCCGTCTTCAGAAATCTATAGAACTATACCTGTTCGTGATGATCTCCTTCGGGCCTTGTTGAATTGTGATTTAATTGGATTCCATACCTTTGATTACGCCAGACATTTCTTGTCCTGTTGTAGCCGGATGTTCGGTTTGGATTATGAGTCTAAGAGGGGTTACATGGGACTAGATTATTACGGTCGAACCGTGATGATTAAGATCCTGCCGGCCGGAATCCACATGGGTCAGCTCGAATCGGTGTTTTCGTTGTCGGAGACGGCTGAAAAGATTAAGGAATTGAAGAAACGATTTGAGGGGAAATTTGTGATTCTGGGTGTGGACGACATGGATTTGTTCAAAGGTATCAACTTTAAGTTTTTAGCAATGGGGCAACTCTTGGATATACACGAGGAGCTAAGGGGTCGAGTTGTTTTAGTCCAGATTCTGAATCCTGCTAGGAGCGAAGGTAAAGACATTCAGGATGTGCAAAAAGAGACCAATGCGATTGCCAAGGAAGTCAATGAGAAATACGGCGAGCCAGGTTACCAGCCAATCATCTTCATCAATGGTCCTGTTTCAACACTCGAGAAAGCTGCCTACTGTGCCATTTCTGACTGCTGCGTTGTGAATGCCGTGAGAGATGGGATGAACTTGGTGCCTTATATGTACACTGTTTGCAGACAGGGCAGCCCGGCGTTGGACAAATCACTTGAAGAAGATGACGACAAGGATTCTAAAAAACCCAAAGAGAGTGTTATCATCGTCTCTGAATTCATCGGATGCTCGCCGTCTCTGAGCGGTGCGATCCGAGTGAACCCGTGGAACGTCGATGAGGTCTCTGAGGCCATGAATTTGGCGATCACATTGCCAGAGGCAGAGAAGAATTTACGTCATGAAAAGCATTATAAGTATATCAGCTCTCACGATGTAACTTATTGGGCTCGAAGTTTTGATCGAGACTTGGAGAGAGCATGCAGAGAACATTACCTCAAGAGGTATTGGGGCGTTGGTCTTGGCTTGGGATTCAGAATTGTGGCTTTGGATCCGACATTCAGGAAGCTTTCAGTGGATAACATTGCATCAGCTTATAAAAACACACACAGTCGTTTGATCCTTCTGGACTATGATGGTACCATGTTGCCGCAGTCATCCATGGACAAGACTCCAAGCAACGAGGTTATTTCTGTCTTGAATTGTCTGTGCAGTGATCCCAACAACACAGTGTTCATTGTGAGTGGAAGAGATAAGAAGTGCCTAAGCAAGTGGTTTTCTCCATGTGAGAAGCTTGGTCTCTCAGCTGAGCATGGTTACTTCACCAGGTGGAGTAAGGATTCTACTTGGGAGACATGTGGGTTGACAATGGACTTTGATTGGAAAAAGATTGCGGAACCAGTCATGGCTCTTTACACAGAAGCAACCGATGGGTCTTTCATTGAACAAAAGGAAAGCGCACTGGTTTGGCATCATCAAGAAGCTGACCCTCACTTTGGATCATCCCAAGCCAAAGAGCTTCTTGATCACCTCGAGAGTGTTCTTGCTAATGAACCAGTCATTGTTAAAAGAGGGCAACATATCGTGGAAGTAAATCCTCAGGGTGTGAGCAAAGGCATAGTGGTGGAAAACCTCATCTCAAGAATGAGGAAAGAAGGAAAGTCTCTGGATTTTCTGTTATGTATAGGAGATGATCGCTCAGATGAAGACATGTTTGAGAGGATTGCTTGCACAGTCTCTAATAACCCAACCCTACCGGCCACAGCTCAAGTCTTTGCCTGCACAGTTGGTCAGAAACCAAGCATGGCAGAATATTACTTGGATGATACTTGTGAAGTCATCAAGTTGCTCAAAGGACTTGCTAATACTTCAGCAGCAGCACCCTCAAGATATTGA 2574 0.4658 MLSRSCIDLLSLVSVDDYRALYQIPRVSTVPGVVSKFEAAEDDHADYGSGFDGIVSSLPQERRIIVANQLPIRASRDVSTKKWSFEFDSDSLVLQLKDGLPSDVDVLYVGSLKDEIDPSEQDEVAQVLLEKFRCVPTFLPSEIHNKYYHGFCKHYLWPLFHYMVPMSTSQGARFDRSQWQAYVLANRIFANKVTEVINPDEDFVWVHDYHLMILPTLLRKRFHRVKLGFFMHNTFPSSEIYRTIPVRDDLLRALLNCDLIGFHTFDYARHFLSCCSRMFGLDYESKRGYMGLDYYGRTVMIKILPAGIHMGQLESVFSLSETAEKIKELKKRFEGKFVILGVDDMDLFKGINFKFLAMGQLLDIHEELRGRVVLVQILNPARSEGKDIQDVQKETNAIAKEVNEKYGEPGYQPIIFINGPVSTLEKAAYCAISDCCVVNAVRDGMNLVPYMYTVCRQGSPALDKSLEEDDDKDSKKPKESVIIVSEFIGCSPSLSGAIRVNPWNVDEVSEAMNLAITLPEAEKNLRHEKHYKYISSHDVTYWARSFDRDLERACREHYLKRYWGVGLGLGFRIVALDPTFRKLSVDNIASAYKNTHSRLILLDYDGTMLPQSSMDKTPSNEVISVLNCLCSDPNNTVFIVSGRDKKCLSKWFSPCEKLGLSAEHGYFTRWSKDSTWETCGLTMDFDWKKIAEPVMALYTEATDGSFIEQKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVIVKRGQHIVEVNPQGVSKGIVVENLISRMRKEGKSLDFLLCIGDDRSDEDMFERIACTVSNNPTLPATAQVFACTVGQKPSMAEYYLDDTCEVIKLLKGLANTSAAAPSRY 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1525 857 Gene3D - 726 855 IPR023214 -
Prci4g1525 857 Gene3D - 597 716 IPR023214 -
Prci4g1525 857 CDD GT20_TPS 62 551 IPR001830 GO:0003824|GO:0005992
Prci4g1525 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 597 714 - -
Prci4g1525 857 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 555 - -
Prci4g1525 857 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 727 856 - -
Prci4g1525 857 Gene3D Glycogen Phosphorylase B; 56 315 - -
Prci4g1525 857 Gene3D Glycogen Phosphorylase B; 316 535 - -
Prci4g1525 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Prci4g1525 857 NCBIfam HAD-IIB family hydrolase 599 805 IPR006379 -
Prci4g1525 857 SUPERFAMILY HAD-like 598 848 IPR036412 -
Prci4g1525 857 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 847 IPR001830 GO:0003824|GO:0005992
Prci4g1525 857 FunFam Alpha,alpha-trehalose-phosphate synthase 316 535 - -
Prci4g1525 857 Pfam Glycosyltransferase family 20 62 551 IPR001830 GO:0003824|GO:0005992
Prci4g1525 857 Pfam Trehalose-phosphatase 601 835 IPR003337 GO:0003824|GO:0005992
Prci4g1525 857 FunFam Trehalose-6-phosphate synthase 2 681 760 - -
Prci4g1525 857 NCBIfam trehalose-phosphatase 597 846 IPR003337 GO:0003824|GO:0005992
Prci4g1525 857 CDD HAD_TPP 599 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1525 Prci-Chr4 12653220 12656645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1525 1 853 Trehalose Biosynthesis Gene Families AT2G18700 65.848 0.0 1184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1525 K16055 - qsa:O6P43_002917 1404.04