Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1521 ATGGGATCCAACCTAAGTTGCTGTGGTTCAGACAAGGTGGAAGAAGTGCCATCAGCATCAGGTGGTGCGGCGAACAACAATTCATGGAGAATATTCACATACAAGGAGTTGCATGCGGCCACCAAAGGATTCAGTGAGGATTGTAAACTTGGTGAAGGTGGCTTTGGAAGTGTCTACTGGGGAAGAACCACTGATGGTCTCCAGATAGCAGTGAAGAAGCTGAAAGCCATGAACTCAAAGGCAGAGATGGAATTCGCAGTAGAGGTAGAAGTTCTGGGGAGGGTGAGGCACAAGAACTTGCTGGGTCTGAGAGGGTACTGCGCCGGCGACGAACAGAGACTGATAGTATACGATTACATGCCAAATCTCAGCCTCCTCTCTCACCTCCACGGCCAGTTCGCCTCTGAAGTCCACCTCGACTGGAAACGAAGAATGAACATCGCCATCGGCTCTGCTCAAGGCCTACTGTATTTGCATCACGAGGTGACGCCTCATATCATTCACAGAGACATAAAGGCAAGCAATGTTCTGTTAAACTCAGACTTCGAGCCGCTGGTTGCTGATTTTGGGTTTGCGAAGCTAATCCCAGAAGGAGTAAGCCACCTGACGACCCGTGTGAAGGGAACTTTAGGGTACTTGGCTCCTGAGTATGCCATGTGGGGCAAGGTCTCTGAAAGCTGCGACGTTTACAGCTTCGGGATTCTTCTGTTAGAGCTCGTGACTGGAAGGAAGCCCATCGAGAAGCTTCCAGGAGGGCTCAAGAGAACCATCACAGAGTGGGCTGAGCCATTCTTAAGCAAAGGCAAGTTCAGGGACATGGTGGATCGAAGACTTAGAGGGAACTTCGACGAGAGACAAGTTGAGCAGATGATCAATGTGGCTGCTCTTTGTGTACAGAGCGAGCCTGAGAAGCGACCAAACATGAAGCAAGTTGTTAACCTGTTGAAAGGGTACGAGGCAGATCATGGGAGGGTGACGAAGACGAGGATTGACAGTATCAAGTACAATGAGCAGCTCATGGAGCTTGATCAGAACAGTGATGATGATGAAGATGAAACCAATGGTGGATATGGTGTTTTTAGTGCTCTTGAGGTGCAAAAGATGCACGATCCTTACAAGCGCCATGGTAATGGTGCAAAAATGGCGAAACCAATTTGA 1158 0.4914 MGSNLSCCGSDKVEEVPSASGGAANNNSWRIFTYKELHAATKGFSEDCKLGEGGFGSVYWGRTTDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGDEQRLIVYDYMPNLSLLSHLHGQFASEVHLDWKRRMNIAIGSAQGLLYLHHEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPFLSKGKFRDMVDRRLRGNFDERQVEQMINVAALCVQSEPEKRPNMKQVVNLLKGYEADHGRVTKTRIDSIKYNEQLMELDQNSDDDEDETNGGYGVFSALEVQKMHDPYKRHGNGAKMAKPI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1521 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Prci4g1521 385 FunFam PTI1-like tyrosine-protein kinase At3g15890 120 333 - -
Prci4g1521 385 SUPERFAMILY Protein kinase-like (PK-like) 28 322 IPR011009 -
Prci4g1521 385 MobiDBLite consensus disorder prediction 1 21 - -
Prci4g1521 385 Pfam Protein tyrosine and serine/threonine kinase 48 315 IPR001245 GO:0004672|GO:0006468
Prci4g1521 385 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1521 385 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Prci4g1521 385 CDD STKc_IRAK 50 317 - -
Prci4g1521 385 ProSiteProfiles Protein kinase domain profile. 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1521 385 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Prci4g1521 385 PANTHER OS01G0253100 PROTEIN 25 320 - -
Prci4g1521 385 Gene3D Transferase(Phosphotransferase) domain 1 120 331 - -
Prci4g1521 385 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1521 Prci-Chr4 12551905 12554247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1521 32 356 Trihelix Transcription Factor Family AT1G70460 46.429 3.71e-97 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Prci4g1521 PK_Tyr_Ser-Thr 6.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1521 - - gsj:114393039 642.114