Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1520 ATGACAAGAAGGCAGTCACAACTTCGGCAGGCTAAAGCCTGTGTCATATCTGTGCTTGGTGAATTTGCAAAGGCTTGTTGGTCTAAGCAGGTGAATCTGGAAGCCAAAGTGGCATTCAGTTCCAATGTAGGTGAAGGTTTAGTTGAAGAAGCCAAGTCCATATCTGCTGAATTTCTTCTTCTTCGTGGTTCTAGAAACCAGTCTAGCAAGAATCAGGCATGTAATGGAATTACCAAGTATTGCTTTCAGAATGTCCACGAAAGCTGCACCATTGTCTCTGTTGGGAAAAGCTCAAAAGCCAGTTTTACAAGCCCCGAAGCAGATAATTATGAATCAAGCTCAGGGTGGTTTAAGGAGGATAAACAAAGTGACAGACGAGAATCCCCTGTTTTGAATGCTTTTATCTCAGACTCTAGGACTCAAACACGTTCACCAAGAACAGTATTGGACGCATTTGAGGGTCAATCTAACAGCACAGAAGATGACACCTTCAGTACAAGGGTCTCAAGCATCACGGACACTCCATCAATGGCTTCGAAAATGAAAAGCAAATCCAATTTTAGGAAACCACAGTCCCCATTCAGACTCATAGCCTCACTGCTTGCCTCACCATTAAGAAGGAAAAACTCCAAAAAGTCCCAAAATGAAAAGAGACAACCTTTGTTAAAATGCTTCAGCTATGAGGAGATCTCCACCGCCACAAATGGCTTCCATCAAGATAATTTGGTGGGACGTGGTGGATACTCTGAAGTATACAGAGGAGATCTTTCTGATGGACAAAGCATTGCAGTGAAAAGGTTGTCTAAGGACAAAAAGGACGCGAACAAGGAAAAGGAGTTCCTCATGGAATTAGGAGTGATTGGACATGTCTGTCATCCTAATACTACATCTTTAGTCGGATGCTGCATTGAAAATGGACTCTACCTGGTTTTCAAGTACTCTCAAAATGGAAACTTAGCCACTGCATTGCATGGTAAATCAGGAACGTCACTTGACTGGGCAGTGAGATACAAAGTTGCCATTGGAGTAGCGAGGGGACTGCATTATCTTCACAAGTGCTGCAAACGCAGAATAATACATCGCGACATTAAAGCCTCCAACGTGCTTCTGGGTCCAGATTATGAACCACAGATTACTGATTTTGGGCTGGCAAAGTGGCTTCCGAACAAATGGACTCACCACGCTGTAATACCAGTGGAAGGCACGTTCGGGTACTTGGCACCAGAGTCCTTCATGCATGGAATAGTGGATGAGAAAACTGATGTTTTTGCTTTTGGGATTCTTCTTCTGGAGATTGTAACTGGAAGAAGACCTGTTGATTCCAAGAAACAGAACCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCAGGGAACATCAGGGAGCTAGCTGATCCGAGAATGGAAGGAGCATATGATGAAGAGGAATTGAACAGAGTAGTGCTCACAGCTTCATACTGTGTGAGACAATCTCCCCTTTGGCGTCCCCAAATGAGCGAGGTATTGGAACTGCTGAGCAGTGGGGAAGATAGTGAGGCTGGGAAGAGCTGGAGGATCCCAAAGTTGACAACATCTGAATCTGATGAACTGGATGATTACTCGATGGCTTTCGGATATGAAGTGCCTTCTGACATATATCTGGAGGAGTTTTTGTGA 1653 0.4422 MTRRQSQLRQAKACVISVLGEFAKACWSKQVNLEAKVAFSSNVGEGLVEEAKSISAEFLLLRGSRNQSSKNQACNGITKYCFQNVHESCTIVSVGKSSKASFTSPEADNYESSSGWFKEDKQSDRRESPVLNAFISDSRTQTRSPRTVLDAFEGQSNSTEDDTFSTRVSSITDTPSMASKMKSKSNFRKPQSPFRLIASLLASPLRRKNSKKSQNEKRQPLLKCFSYEEISTATNGFHQDNLVGRGGYSEVYRGDLSDGQSIAVKRLSKDKKDANKEKEFLMELGVIGHVCHPNTTSLVGCCIENGLYLVFKYSQNGNLATALHGKSGTSLDWAVRYKVAIGVARGLHYLHKCCKRRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPESFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSKKQNLLLWAKPLMESGNIRELADPRMEGAYDEEELNRVVLTASYCVRQSPLWRPQMSEVLELLSSGEDSEAGKSWRIPKLTTSESDELDDYSMAFGYEVPSDIYLEEFL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1520 550 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Prci4g1520 550 MobiDBLite consensus disorder prediction 113 127 - -
Prci4g1520 550 ProSiteProfiles Protein kinase domain profile. 237 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1520 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Prci4g1520 550 MobiDBLite consensus disorder prediction 100 170 - -
Prci4g1520 550 SMART serkin_6 237 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1520 550 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 314 518 - -
Prci4g1520 550 Gene3D Phosphorylase Kinase; domain 1 198 313 - -
Prci4g1520 550 MobiDBLite consensus disorder prediction 133 170 - -
Prci4g1520 550 Gene3D Transferase(Phosphotransferase) domain 1 315 520 - -
Prci4g1520 550 Coils Coil 264 284 - -
Prci4g1520 550 Pfam Protein tyrosine and serine/threonine kinase 239 503 IPR001245 GO:0004672|GO:0006468
Prci4g1520 550 SUPERFAMILY Protein kinase-like (PK-like) 213 504 IPR011009 -
Prci4g1520 550 FunFam Putative receptor-like serine/threonine-protein kinase 204 313 - -
Prci4g1520 550 PANTHER OS08G0249100 PROTEIN 19 532 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1520 Prci-Chr4 12544894 12548572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1520 225 543 Trihelix Transcription Factor Family AT1G70460 40.719 2.07e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci4g1520 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1520 - - pcin:129309776 1104.35