Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1518 ATGGTGCTTGCTTCTTCCCCTAGTAAAATACTAATTGGTCTGTCGTTAGACCGTGATGATAGCAGAGAACTTCTCTCATGGGCTGTTAGAGTTCTAGCCAATCCGAATGACACCATTGTCGCACTCCATGTACTTGTTTCTAAGGATAAGAAGAAAAGGAAGAAGAAGCGTGCTTCAATGACAAGAAGGCAGTCACAACTTCGGCAGGCTAAAGCCTGTGTCATATCTGTGCTTGGTGAATTTGCAAAGGCTTGTTGGTCTAAGCAGGTGAATCTGGAAGCCAAAGTGGCATTCAGTTCCAATGTAGGTGAAGGTTTAGTTGAAGAAGCCAAGTCCATATCTGCTGAATTTCTTCTTCTTCGTGGTTCTAGAAACCAGTCTAGCAAGAATCAGGCATGTAATGGAATTACCAAGTATTGCTTTCAGAATGTCCACGAAAGCTGCACCATTGTCTCTGTTGGGAAAAGCTCAAAAGCCAGTTTTACAAGCCCCGAAGATAATTATGAATCAAGCTCAGGGTGGTTTAAGGAGGATAAACAAAGTGACAGACGAGAATCCCCTGTTTTGAATGCTTTTATCTCAGACTCTAGGACTCAAACACGTTCACCAAGAACAGTATTGGACGCATTTGAGGGTCAATCTAACAGCACAGAAGATGACACCTTCAGTACAAGGGTCTCAAGCATCACGGACACTCCATCAATGGCTTCGAAAATGAAAAGCAAATCCAATTTTAGGAAACCACAGTCCCCATTCAGACTCATAGCCTCACTGCTTGCCTCACCATTAAGAAGGAAAAACTCCAAAAAGTCCCAAAATGAAAAGAGACAACCTTTGTTAAAATGCTTCAGCTATGAGGAGATCTCCACCGCCACAAATGGCTTCCATCAAGATAATTTGGTGGGACGTGGTGGATACTCTGAAGTATACAGAGGAGATCTTTCTGATGGACAAAGCATTGCAGTGAAAAGGTTGTCTAAGGACAAAAAGGACGCGAACAAGGAAAAGGAGTTCCTCATGGAATTAGGAGTGATTGGACATGTCTGTCATCCTAATACTACATCTTTAGTCGGATGCTGCATTGAAAATGGACTCTACCTGGTTTTCAAGTACTCTCAAAATGGAAACTTAGCCACTGCATTGCATGGTAAATCAGGAACGTCACTTGACTGGGCAGTGAGATACAAAGTTGCCATTGGAGTAGCGAGGGGACTGCATTATCTTCACAAGTGCTGCAAACGCAGAATAATACATCGCGACATTAAAGCCTCCAACGTGCTTCTGGGTCCAGATTATGAACCACAGATTACTGATTTTGGGCTGGCAAAGTGGCTTCCGAACAAATGGACTCACCACGCTGTAATACCAGTGGAAGGCACGTTCGGGTACTTGGCACCAGAGTCCTTCATGCATGGAATAGTGGATGAGAAAACTGATGTTTTTGCTTTTGGGATTCTTCTTCTGGAGATTGTAACTGGAAGAAGACCTGTTGATTCCAAGAAACAGAACCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCAGGGAACATCAGGGAGCTAGCTGATCCGAGAATGGAAGGAGCATATGATGAAGAGGAATTGAACAGAGTAGTGCTCACAGCTTCATACTGTGTGAGACAATCTCCCCTTTGGCGTCCCCAAATGAGCGAGGTATTGGAACTGCTGAGCAGTGGGGAAGATAGTGAGGCTGGGAAGAGCTGGAGGATCCCAAAGTTGACAACATCTGAATCTGATGAACTGGATGATTACTCGATGGCTTTCGGATATGAAGTGCCTTCTGACATATATCTGGAGGAGTTTTTGTGA 1827 0.4406 MVLASSPSKILIGLSLDRDDSRELLSWAVRVLANPNDTIVALHVLVSKDKKKRKKKRASMTRRQSQLRQAKACVISVLGEFAKACWSKQVNLEAKVAFSSNVGEGLVEEAKSISAEFLLLRGSRNQSSKNQACNGITKYCFQNVHESCTIVSVGKSSKASFTSPEDNYESSSGWFKEDKQSDRRESPVLNAFISDSRTQTRSPRTVLDAFEGQSNSTEDDTFSTRVSSITDTPSMASKMKSKSNFRKPQSPFRLIASLLASPLRRKNSKKSQNEKRQPLLKCFSYEEISTATNGFHQDNLVGRGGYSEVYRGDLSDGQSIAVKRLSKDKKDANKEKEFLMELGVIGHVCHPNTTSLVGCCIENGLYLVFKYSQNGNLATALHGKSGTSLDWAVRYKVAIGVARGLHYLHKCCKRRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPESFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSKKQNLLLWAKPLMESGNIRELADPRMEGAYDEEELNRVVLTASYCVRQSPLWRPQMSEVLELLSSGEDSEAGKSWRIPKLTTSESDELDDYSMAFGYEVPSDIYLEEFL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1518 608 SMART serkin_6 295 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1518 608 MobiDBLite consensus disorder prediction 158 182 - -
Prci4g1518 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Prci4g1518 608 PANTHER OS08G0249100 PROTEIN 51 590 IPR046958 -
Prci4g1518 608 Pfam Universal stress protein family 9 151 IPR006016 -
Prci4g1518 608 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 149 - -
Prci4g1518 608 Coils Coil 322 342 - -
Prci4g1518 608 CDD USP_Like 9 124 - -
Prci4g1518 608 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 372 576 - -
Prci4g1518 608 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Prci4g1518 608 MobiDBLite consensus disorder prediction 203 228 - -
Prci4g1518 608 ProSiteProfiles Protein kinase domain profile. 295 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1518 608 Gene3D HUPs 3 152 IPR014729 -
Prci4g1518 608 Pfam Protein tyrosine and serine/threonine kinase 297 561 IPR001245 GO:0004672|GO:0006468
Prci4g1518 608 Gene3D Phosphorylase Kinase; domain 1 256 371 - -
Prci4g1518 608 Gene3D Transferase(Phosphotransferase) domain 1 373 578 - -
Prci4g1518 608 FunFam Putative receptor-like serine/threonine-protein kinase 262 371 - -
Prci4g1518 608 SUPERFAMILY Protein kinase-like (PK-like) 271 562 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1518 Prci-Chr4 12544894 12548623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1518 283 601 Trihelix Transcription Factor Family AT1G70460 40.719 1.12e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci4g1518 PK_Tyr_Ser-Thr 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1518 - - pcin:129309776 1190.64