Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1485 ATGGAAATGGAAACAGAAGTTCCTTGCGATGAATTCATTTTCCGTTCCAAGCTACCAGACATTCACATCCCAACCCACCTTCCTTTGCACTCTTACTGTTTCGAGCGTTTGTCTCCGTTCAAACACCGTCCTTGCTTGATCAACAGCACCACAGGCCAGACATTCACCTACGCCGACGGTGAACTTTTTGCCAGAAAAGTCGCCTCCGGTCTCTACAACCTTGGCGTCGGTCATGGCCACGTCATCATGCTCCTCCTTCTGAACTCTCCCCATTTCGTCTTCTCCTTCCTCGGAGCCTCCTACCTCGGAGCCATCGTCACTACCGCCAACCCATTTTACACCATAGCAGAGGTCGCCAAGCAAGCCACCGCTTCTAATACCAGCCTGATAATCACGCATGCGTCCTTTGTTGACAAGGTTAAGGATCTTGCAACAGTCAACAGCGTTAAAGTGGTGCTCATCGATGATGAAATATCACCCTTGTCGGTGGATACGGCTGACCATTTCGTACGTTTCTCATATTTAATGAACGCCGACGAGAATGAGATCCCGCCGGTGACGATCTCTACAGAAGACGTCGTCGCGCTGCCTTATTCATCAGGAACCACAGGGCCTCCCAAAGGAGTTATGCTAACCCACAAAAGTCTAGTCACAAATGTGGCTCAACTGGTTGATGGAGAAAATCCTAATCTGTATTTTCACAAGGAGGATGTGATCGCGTGCGTTTGTCCTCTGTTTCACAGTTATTCTCTGTTCACTATTCTACTCACTGGGCTTCGAGTCGGTGCTGCGATATTGATCATACACAAGTTTGAGATAGAGACGATGTTAGCGTTGGTCCAAAAACACAAAGTGACCGTTGCGCCGTTCGTGCCACCCATTTTGCAGGCCATTGTCAAATTCCAAAACCTGCAAGAATACGACCTGTCGTCGATTAGGATGATCATGTGCGGGGCAGCCCCATTGAAGAAAGAGCTCGAGGATGCTGTGAGGGCCAAGATTCCCAATGCCACTCTTGGACAGGCATATGGGATGACGGAGGCTGGTCCTGCGGTGTCAATGAGCTTAGCTTTTGGGAAAGAGGCGTTCGAGGTGAAATCAGGTGGGTGCGGGACCATCGTAAGAAATGCCGAGATGAAGATCGTTGATCCTGACACCGGCATATCCCTTCGCCGGAATCAAGTCGGCGAGATCTGCATTAAAGGCAACCAGATTATGAAAGGTTATCTAAACGATGCAGAAGCAACAGAGAGAACGATAGACGAAAGAGGATGGCTGCACAGTGGTGATATTGGATATGTAGACGATGACGACGAGCTGTTCATTGTGGATCGCTTGAAGGAAATGATCAAATACAAAGGCTTCCAAGTGGCTCCTGCTGAACTCGAGGCTCTTCTCATCTCTCATCCTTTCATTTCTGATGCCGCTCTTGTTCCGATGAAAGATGAAGTTGCAGGAGAGGTTCCTGTGGCATTTGTTGTAAAATCGCAAGGTTTTAACATCTCAGCAGATGAAATCATGGAGTACATCTCCAGCAAGGTGGTGTACTACAAGAGAATCAAGAGGGTTTTCTTCGTGGGCTCAATTCCAAGGACACCCTCCGGCAAGATCCTGCGCAAAGACCTGAGAGCAAGGCTCTCCTGCGGGTGA 1650 0.4891 MEMETEVPCDEFIFRSKLPDIHIPTHLPLHSYCFERLSPFKHRPCLINSTTGQTFTYADGELFARKVASGLYNLGVGHGHVIMLLLLNSPHFVFSFLGASYLGAIVTTANPFYTIAEVAKQATASNTSLIITHASFVDKVKDLATVNSVKVVLIDDEISPLSVDTADHFVRFSYLMNADENEIPPVTISTEDVVALPYSSGTTGPPKGVMLTHKSLVTNVAQLVDGENPNLYFHKEDVIACVCPLFHSYSLFTILLTGLRVGAAILIIHKFEIETMLALVQKHKVTVAPFVPPILQAIVKFQNLQEYDLSSIRMIMCGAAPLKKELEDAVRAKIPNATLGQAYGMTEAGPAVSMSLAFGKEAFEVKSGGCGTIVRNAEMKIVDPDTGISLRRNQVGEICIKGNQIMKGYLNDAEATERTIDERGWLHSGDIGYVDDDDELFIVDRLKEMIKYKGFQVAPAELEALLISHPFISDAALVPMKDEVAGEVPVAFVVKSQGFNISADEIMEYISSKVVYYKRIKRVFFVGSIPRTPSGKILRKDLRARLSCG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1485 549 Gene3D - 447 547 IPR045851 -
Prci4g1485 549 CDD 4CL 23 542 - -
Prci4g1485 549 FunFam 4-coumarate--CoA ligase 2 448 548 - -
Prci4g1485 549 FunFam Long-chain-fatty-acid--CoA ligase FadD 15 447 - -
Prci4g1485 549 SUPERFAMILY Acetyl-CoA synthetase-like 13 546 - -
Prci4g1485 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 544 - -
Prci4g1485 549 Gene3D - 5 446 IPR042099 -
Prci4g1485 549 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Prci4g1485 549 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Prci4g1485 549 Pfam AMP-binding enzyme 40 452 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1485 Prci-Chr4 12189576 12192257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1485 1 514 Monolignol Biosynthesis Gene Families AT1G51680 62.863 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1485 K01904 - qsa:O6P43_022302 775.393