Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1484 ATGGAAACTCCACATAATGAATTCATTTTCCGTTCAAAACTGCCAGACATTTACATCCCTTCCCATCTCCCTCTCCACACTTACTGCTTCCAGAACTTGTCCCAGTTCAAAGACCGTCCCTGCCTTATCAATGGCAACACCGGCGAGACCTTCACCTACGCCGATGTCGAGCTCACCGCCCGGAAAGTCGCCTCAGGTCTCAACAACCTCGGCATCGAACAAGGCCACGTCATCATGCTTCTCCTCCAGAACTGTCCCCAATTCGTCTTCGCCTTCCTCGGAGCCTCCTACCTCGGCGCCACCGTCACGACTGCCAACCCATTTTTCACCCCGGCCGAGATCGCCAAGCAAGCCACGGCTTCCAAAACCCAGCTCATCATAACACAATCATCCTTAGCCGACAAGGTTACGGATTTGGCCAGAGACAGTGACATCCAAGTGATGTGTATCGACGAGACGACTGATTTCCTACTTTTCTCGGATTTAACGAAGGCCGATGAAGGGGGAATCCCGGCGGTGAAGATCTCCGCAGACGACGTCGTTGCGCTGCCTTATTCATCAGGCACGACAGGACTTCCCAAAGGGGTCATGCTCACGCACAAGAGTCTCGTTACAAGTGTGGCTCAACAGGTTGATGGAGAGAACCCTAATCTGTATCTTCAAAGAGACGATGTGATTGTGTGCGTTTTGCCTCTGTTTCACATTTATGCGATGAACTCTGTGTTGCTGTGTGGGCTTCGTGTCGGTGCTGCGATTTTGATCGTACAGAAGTTTGAGATAGGGACGTTGCTTGAGCTGGTAGAGAAACACCGAGTGAGCGTTGCGCCGTTTGTGCCGCCCATCTTGTTGGCCTTTGCGAAGAACCCAAACCTGCATCGATACGACCTGTCGTCTATAAGGATGATTTTGTCCGGTGCGGCTCCACTGGGGAAAGAGCTCGAGGATGCTGTGAGGGCCAAGCTTCCTCAAGCCACACTCGGACAGGGATATGGGATGACTGAGGCAGGGCCCGTGCTTTCAATGAGCTTAGCGTTTGCGAAGAAGGCGTATGGGGCAAAATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCTGAGATGAAGATCGTTGATCCTCACAGTGGCCTGTCCCTTTCCCGGAATCAAGTAGGTGAGATTTGCATCCGAGGCCATCAGATTATGAAAGGTTATTTAAATGACGCGGAGGCGACGAATAGAACAATAGACGAAAGAGGATGGTTGCACAGTGGTGATATTGGATACGTTGACGATGACGACGAGCTCTTCATTGTGGATCGCTTGAAGGAACTCATCAAATACAAAGGCTTCCAGGTGGCTCCTGCTGAGCTGGAAGCTCTCCTCATTTCTCATCCCTCCATTTCTGATGCCGCCGTTGTTCCGATGAAAGATGAAGCAGCCGGAGAAGTTCCAGTGGCTTTTGTTGTAACATCAAATGCTTCTAAGGTCTCTGATCATGAAATCAAGCATTACATCTCCAAGCAGGTTGTATTTTACAAGAGAATCAACAGGGTTATTTTCGTAAACTCAATTCCAAAGGCACCCTCTGGCTAG 1569 0.5061 METPHNEFIFRSKLPDIYIPSHLPLHTYCFQNLSQFKDRPCLINGNTGETFTYADVELTARKVASGLNNLGIEQGHVIMLLLQNCPQFVFAFLGASYLGATVTTANPFFTPAEIAKQATASKTQLIITQSSLADKVTDLARDSDIQVMCIDETTDFLLFSDLTKADEGGIPAVKISADDVVALPYSSGTTGLPKGVMLTHKSLVTSVAQQVDGENPNLYLQRDDVIVCVLPLFHIYAMNSVLLCGLRVGAAILIVQKFEIGTLLELVEKHRVSVAPFVPPILLAFAKNPNLHRYDLSSIRMILSGAAPLGKELEDAVRAKLPQATLGQGYGMTEAGPVLSMSLAFAKKAYGAKSGACGTVVRNAEMKIVDPHSGLSLSRNQVGEICIRGHQIMKGYLNDAEATNRTIDERGWLHSGDIGYVDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSISDAAVVPMKDEAAGEVPVAFVVTSNASKVSDHEIKHYISKQVVFYKRINRVIFVNSIPKAPSG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1484 522 ProSitePatterns Putative AMP-binding domain signature. 183 194 IPR020845 -
Prci4g1484 522 FunFam 4-coumarate--CoA ligase 2 435 522 - -
Prci4g1484 522 CDD 4CL 19 522 - -
Prci4g1484 522 Gene3D - 434 522 IPR045851 -
Prci4g1484 522 Pfam AMP-binding enzyme C-terminal domain 448 522 IPR025110 -
Prci4g1484 522 Gene3D - 3 433 IPR042099 -
Prci4g1484 522 Pfam AMP-binding enzyme 31 439 IPR000873 -
Prci4g1484 522 SUPERFAMILY Acetyl-CoA synthetase-like 8 522 - -
Prci4g1484 522 FunFam Long-chain-fatty-acid--CoA ligase FadD 11 434 - -
Prci4g1484 522 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1484 Prci-Chr4 12180515 12187000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1484 5 501 Monolignol Biosynthesis Gene Families AT1G51680 67.787 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1484 K01904 - qsa:O6P43_022302 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1484 4 12180515 12187000 Prci4g1484 4 12180515 12187000 ECH