Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1483 ATGGAAACTCCACATAATGAATTCATTTTCCGTTCAAAACTGCCAGACATTTACATCCCTTCCCATCTCCCTCTCCACACTTACTGCTTCCAGAACTTGTCCCAGTTCAAAGACCGTCCCTGCCTTATCAATGGCAACACCGGCGAGACCTTCACCTACGCCGATGTCGAGCTCACCGCCCGGAAAGTCGCCTCAGGTCTCAACAACCTCGGCATCGAACAAGGCCACGTCATCATGCTTCTCCTCCAGAACTGTCCCCAATTCGTCTTCGCCTTCCTCGGAGCCTCCTACCTCGGCGCCACCGTCACGACTGCCAACCCATTTTTCACCCCGGCCGAGATCGCCAAGCAAGCCACGGCTTCCAAAACCCAGCTCATCATAACACAATCATCCTTAGCCGACAAGGTTACGGATTTGGCCAGAGACAGTGACATCCAAGTGATGTGTATCGACGAGACGACTGATTTCCTACTTTTCTCGGATTTAACGAAGGCCGATGAAGGGGGAATCCCGGCGGTGAAGATCTCCGCAGACGACGTCGTTGCGCTGCCTTATTCATCAGGCACGACAGGACTTCCCAAAGGGGTCATGCTCACGCACAAGAGTCTCGTTACAAGTGTGGCTCAACAGGTTGATGGAGAGAACCCTAATCTGTATCTTCAAAGAGACGATGTGATTGTGTGCGTTTTGCCTCTGTTTCACATTTATGCGATGAACTCTGTGTTGCTGTGTGGGCTTCGTGTCGGTGCTGCGATTTTGATCGTACAGAAGTTTGAGATAGGGACGTTGCTTGAGCTGGTAGAGAAACACCGAGTGAGCGTTGCGCCGTTTGTGCCGCCCATCTTGTTGGCCTTTGCGAAGAACCCAAACCTGCATCGATACGACCTGTCGTCTATAAGGATGATTTTGTCCGGTGCGGCTCCACTGGGGAAAGAGCTCGAGGATGCTGTGAGGGCCAAGCTTCCTCAAGCCACACTCGGACAGGGATATGGGATGACTGAGGCAGGGCCCGTGCTTTCAATGAGCTTAGCGTTTGCGAAGAAGGCGTATGGGGCAAAATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCTGAGATGAAGATCGTTGATCCTCACAGTGGCCTGTCCCTTTCCCGGAATCAAGTAGGTGAGATTTGCATCCGAGGCCATCAGATTATGAAAGGTTATTTAAATGACGCGGAGGCGACGAATAGAACAATAGACGAAAGAGGATGGTTGCACAGTGGTGATATTGGATACGTTGACGATGACGACGAGCTCTTCATTGTGGATCGCTTGAAGGAACTCATCAAATACAAAGGCTTCCAGGTGGCTCCTGCTGAGCTGGAAGCTCTCCTCATTTCTCATCCCTCCATTTCTGATGCCGCCGTTGTTCCGTACATTATTGAATTGAGTTATTTTAGGATGAAAGATGAAGCAGCCGGAGAAGTTCCAGTGGCTTTTGTTGTAACATCAAATGCTTCTAAGGTCTCTGATCATGAAATCAAGCATTACATCTCCAAGCAGGTTGTATTTTACAAGAGAATCAACAGGGTTATTTTCGTAAACTCAATTCCAAAGGCACCCTCTGGCTAG 1596 0.5013 METPHNEFIFRSKLPDIYIPSHLPLHTYCFQNLSQFKDRPCLINGNTGETFTYADVELTARKVASGLNNLGIEQGHVIMLLLQNCPQFVFAFLGASYLGATVTTANPFFTPAEIAKQATASKTQLIITQSSLADKVTDLARDSDIQVMCIDETTDFLLFSDLTKADEGGIPAVKISADDVVALPYSSGTTGLPKGVMLTHKSLVTSVAQQVDGENPNLYLQRDDVIVCVLPLFHIYAMNSVLLCGLRVGAAILIVQKFEIGTLLELVEKHRVSVAPFVPPILLAFAKNPNLHRYDLSSIRMILSGAAPLGKELEDAVRAKLPQATLGQGYGMTEAGPVLSMSLAFAKKAYGAKSGACGTVVRNAEMKIVDPHSGLSLSRNQVGEICIRGHQIMKGYLNDAEATNRTIDERGWLHSGDIGYVDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSISDAAVVPYIIELSYFRMKDEAAGEVPVAFVVTSNASKVSDHEIKHYISKQVVFYKRINRVIFVNSIPKAPSG 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1483 531 ProSitePatterns Putative AMP-binding domain signature. 183 194 IPR020845 -
Prci4g1483 531 Gene3D - 3 433 IPR042099 -
Prci4g1483 531 SUPERFAMILY Acetyl-CoA synthetase-like 8 531 - -
Prci4g1483 531 Pfam AMP-binding enzyme C-terminal domain 448 531 IPR025110 -
Prci4g1483 531 Pfam AMP-binding enzyme 31 439 IPR000873 -
Prci4g1483 531 CDD 4CL 19 531 - -
Prci4g1483 531 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 530 - -
Prci4g1483 531 FunFam Long-chain-fatty-acid--CoA ligase FadD 11 434 - -
Prci4g1483 531 Gene3D - 434 531 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1483 Prci-Chr4 12180515 12187000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1483 5 510 Monolignol Biosynthesis Gene Families AT1G51680 66.602 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1483 K01904 - qsa:O6P43_022302 835.099