Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1475 ATGGATACAGATGAGGAGTTGTCAATTGTTCTCGAACTATCTAAAGATGACATTTTCTATGATAAAAAGGAGGTGGAACTTTATTTTGCTGATGATGCAAGTACATTAGGGGAATTTTACAGCCCTAGGAATGAGTTAGAGGCTCTCAATTCCATCATTTCCCTCATTGACACATTACTTTCTAGTTGTAAGCATCCTCACACAAATTTACTGCGAGAGTTGCGGACAACAATTCTTGCCTTAATTTCTGATTTTGGGGGCAAGGACAGTTTGGAAGCAAAGGTCGAAAAAGACCACAGATGTGAACAAGAAGAACAACTCTTAGAATGGGGTAAAAGCAATGGCATAAAGACACAATTATGGATAGCATATGTCAAAGGAGCAGGTCGAGGTGGCATAGCAGAAAAGGATCTTAAAGTTGGAGATATTGCTCTAGAAATTCCAGTATCCATTATCATTAATGAGGAGCTTGTGCATGAAACTGATATGTACTGTGCCCTAAAGGAAGTTGATGGCATATCACCTGAGACAATATTGCTATTATGGAGCATGAAAGAGAGGCACAATCAGGATTCAAGATTCAGAGCTTACTTTGACTCGCTCCCAGAAAACTTTAATACTGGGTTGAGCTTTGGTATTGATGCAATCACAACATCAGAAGGAACCTTGCTCTTGGAAGAGATAATGGAAGCAAGACAGCATCTTCATGCTCAGTATGATCAATTATTCCCTACTCTGTGCAATGCTTTTCCTGATATATTTCCACTAAAGCTGTACACGTGGGAGCAATTTCTATGGGCCTGTGAACTCTGGTACTCAAATAGTATGAAGATAATGTTTTCTGATGGGACTTTAAGGACGTGCTTAATTCCTATTGCTGGATTTCTTAATCATTCGTTGTGCCCACACATTCTGCACTATGGCAAAGTAGATCCTGCAACAAATTCATTGAAATTTCCTCTTTCAAGACCATGCAGATCTGGAGAAGAATGCTGTTTAAGCTATGGGAACTTCTCTAATTCTCATCTCATTACCTTTTATGGTTTCTTACCACAAGGAGACAACCCATATGACGTCATCCCACTTGACATTGATGCTTCTGGCGTTGGCTCCTTGGAGGATGAACCCGTTTCCAGCTGGAGCAATCACATGGTGCGGGGTACTTGGCTCTCCAACAACCACAATTTGTACTACTATGGCCTCCCCTCCCCGCTGTTGGACCATTTTCGAAGATGTCGAAATCCCATGTTGCATACAAAGACCTTTTTGCAAGGGGACTTGGAAAATGAGCTGGAAATTCTAGAAGATCTCAGATTTATCTTCGATAACATGATGGACAATTTGGATGACACAAATCTTGATGATAACAGAGAAAACTGCAGTTGGGATGAAAAATTGGCACTGGAGTATAAAATTCTACAAAGACGAATGGTCTCCTCTATCTCAACTTCATGCAATACTGGCATCGACGTGGTCAAGAATGAACTGTATAAGTGCATGGCCGAGGACATCCGAGGGTAG 1521 0.4096 MDTDEELSIVLELSKDDIFYDKKEVELYFADDASTLGEFYSPRNELEALNSIISLIDTLLSSCKHPHTNLLRELRTTILALISDFGGKDSLEAKVEKDHRCEQEEQLLEWGKSNGIKTQLWIAYVKGAGRGGIAEKDLKVGDIALEIPVSIIINEELVHETDMYCALKEVDGISPETILLLWSMKERHNQDSRFRAYFDSLPENFNTGLSFGIDAITTSEGTLLLEEIMEARQHLHAQYDQLFPTLCNAFPDIFPLKLYTWEQFLWACELWYSNSMKIMFSDGTLRTCLIPIAGFLNHSLCPHILHYGKVDPATNSLKFPLSRPCRSGEECCLSYGNFSNSHLITFYGFLPQGDNPYDVIPLDIDASGVGSLEDEPVSSWSNHMVRGTWLSNNHNLYYYGLPSPLLDHFRRCRNPMLHTKTFLQGDLENELEILEDLRFIFDNMMDNLDDTNLDDNRENCSWDEKLALEYKILQRRMVSSISTSCNTGIDVVKNELYKCMAEDIRG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1475 506 Pfam SET domain 129 336 IPR001214 GO:0005515
Prci4g1475 506 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 96 454 - -
Prci4g1475 506 CDD SET_LSMT 122 350 - -
Prci4g1475 506 Gene3D set domain protein methyltransferase, domain 1 49 349 - -
Prci4g1475 506 FunFam Transcription factor, E2F and DP-related 102 350 - -
Prci4g1475 506 SUPERFAMILY SET domain 103 357 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1475 Prci-Chr4 12085497 12091795 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci4g1475 SET 4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1475 K19199 - gmx:100778605 750.355