Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1474 ATGAGTGATACTGTGAAAGTACTGGTTCAGATTGCAAGAATCATACATTTGAATGAGGTGGAACTTTATTTTGCTGATGATGCAAGTACATTAGGGGAATTTTACAGCCCTAGGAATGAGTTAGAGGCTCTCAATTCCATCATTTCCCTCATTGACACATTACTTTCTAGTTGTAAGCATCCTCACACAAATTTACTGCGAGAGTTGCGGACAACAATTCTTGCCTTAATTTCTGATTTTGGGGGCAAGGACAGTTTGGAAGCAAAGGTCGAAAAAGACCACAGATGTGAACAAGAAGAACAACTCTTAGAATGGGGTAAAAGCAATGGCATAAAGACACAATTATGGATAGCATATGTCAAAGGAGCAGGTCGAGGTGGCATAGCAGAAAAGGATCTTAAAGTTGGAGATATTGCTCTAGAAATTCCAGTATCCATTATCATTAATGAGGAGCTTGTGCATGAAACTGATATGTACTGTGCCCTAAAGGAAGTTGATGGCATATCACCTGAGACAATATTGCTATTATGGAGCATGAAAGAGAGGCACAATCAGGATTCAAGATTCAGAGCTTACTTTGACTCGCTCCCAGAAAACTTTAATACTGGGTTGAGCTTTGGTATTGATGCAATCACAACATCAGAAGGAACCTTGCTCTTGGAAGAGATAATGGAAGCAAGACAGCATCTTCATGCTCAGTATGATCAATTATTCCCTACTCTGTGCAATGCTTTTCCTGATATATTTCCACTAAAGCTGTACACGTGGGAGCAATTTCTATGGGCCTGTGAACTCTGGTACTCAAATAGTATGAAGATAATGTTTTCTGATGGGACTTTAAGGACGTGCTTAATTCCTATTGCTGGATTTCTTAATCATTCGTTGTGCCCACACATTCTGCACTATGGCAAAGTAGATCCTGCAACAAATTCATTGAAATTTCCTCTTTCAAGACCATGCAGATCTGGAGAAGAATGCTGTTTAAGCTATGGGAACTTCTCTAATTCTCATCTCATTACCTTTTATGGTTTCTTACCACAAGGAGACAACCCATATGACGTCATCCCACTTGACATTGATGCTTCTGGCGTTGGCTCCTTGGAGGATGAACCCGTTTCCAGCTGGAGCAATCACATGGTGCGGGGTACTTGGCTCTCCAACAACCACAATTTGTACTACTATGGCCTCCCCTCCCCGCTGTTGGACCATTTTCGAAGATGTCGAAATCCCATGTTGCATACAAAGACCTTTTTGCAAGGGGACTTGGAAAATGAGCTGGAAATTCTAGAAGATCTCAGATTTATCTTCGATAACATGATGGACAATTTGGATGACACAAATCTTGATGATAACAGAGAAAACTGCAGTTGGGATGAAAAATTGGCACTGGAGTATAAAATTCTACAAAGACGAATGGTCTCCTCTATCTCAACTTCATGCAATACTGGCATCGACGTGGTCAAGAATGAACTGTATAAGTGCATGGCCGAGGACATCCGAGGGTAG 1506 0.411 MSDTVKVLVQIARIIHLNEVELYFADDASTLGEFYSPRNELEALNSIISLIDTLLSSCKHPHTNLLRELRTTILALISDFGGKDSLEAKVEKDHRCEQEEQLLEWGKSNGIKTQLWIAYVKGAGRGGIAEKDLKVGDIALEIPVSIIINEELVHETDMYCALKEVDGISPETILLLWSMKERHNQDSRFRAYFDSLPENFNTGLSFGIDAITTSEGTLLLEEIMEARQHLHAQYDQLFPTLCNAFPDIFPLKLYTWEQFLWACELWYSNSMKIMFSDGTLRTCLIPIAGFLNHSLCPHILHYGKVDPATNSLKFPLSRPCRSGEECCLSYGNFSNSHLITFYGFLPQGDNPYDVIPLDIDASGVGSLEDEPVSSWSNHMVRGTWLSNNHNLYYYGLPSPLLDHFRRCRNPMLHTKTFLQGDLENELEILEDLRFIFDNMMDNLDDTNLDDNRENCSWDEKLALEYKILQRRMVSSISTSCNTGIDVVKNELYKCMAEDIRG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1474 501 CDD SET_LSMT 117 345 - -
Prci4g1474 501 Pfam SET domain 124 331 IPR001214 GO:0005515
Prci4g1474 501 SUPERFAMILY SET domain 98 352 IPR046341 -
Prci4g1474 501 FunFam Transcription factor, E2F and DP-related 97 345 - -
Prci4g1474 501 Gene3D set domain protein methyltransferase, domain 1 44 344 - -
Prci4g1474 501 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 89 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1474 Prci-Chr4 12085497 12091795 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci4g1474 SET 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1474 K19199 - gmx:100778605 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1474 4 12085497 12091795 Prci4g1474 4 12085497 12091795 ECH