Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1443 ATGGACTCTTATCCCAACTGGCTCGCTTTCTCTCTCTCTAATCACTCCCCTCTCTTCCATTCATTCTCCTCAGGTACCACCGATGATGCGTCGCCGCAGGCGGCTGTTGGAGGACCTGCCACCAGCAACGACCTCTCCATCTTCGCCGGAGGCAGCCGCAAGTTCGAGGACTTCCTGGGCGGCTCCTCCGCCTCGTCGGTAGCAGATGCTACTGCTCCTCCTCCTCAGTTCTCAGCCGACAACGTTTTCAGTTCTGATCTCAAAACCATAGCCGCCGGCTTTCTCCCGCGCTTGGCCGCCGCCGAACAAGCCGAGCCTCGAAAACAGGCCCTGGCCGTGACCGTGCCTTCCCCTAGGAAGACCGCCGACACATTCGGCCAACGCACCTCCATCTACCGCGGCGTAACACGGCATAGATGGACTGGGAGATATGAAGCTCATCTATGGGATAATAGTTGTAGAAGAGAAGGTCAAAGTAGGAAAGGAAGGCAAGTTTATTTGGGTGGCTACGATAAGGAAGAGAGAGCAGCCAGAGCTTATGATCTCGCTGCTCTTAAATATTGGGGTCCAACTACCACCACCAACTTTCAGATTTCGAACTATGAGAAGGAACTGGAAGAGATGAAGAACATGACAAGGCAGGAATTTGTTGCTTCACTACGAAGGAAGAGTAGTGGCTTCTCTAGAGGGGCTTCAATATACAGAGGAGTGACAAGGCACCACCAGCATGGGCGATGGCAAGCAAGAATTGGCCGAGTCGCCGGAAATAAAGACCTTTATCTCGGCACTTTTAGTACTCAAGAGGAAGCTGCTGAAGCATATGACATTGCAGCTATAAAATTTAGAGGATTAAGTGCAGTGACCAACTTTGACATGAGCCGATACGACGTGAAGAGCATAGCAAACAGCAGTCTTCCCATAGGAGGATTATCATCCAAAGCCGAAAACTCATCAGACTCTTCTGCATCTGACAGCAAAAGCAACGATGGAAGCCTCAGATCAGCCGATAGTAACAACGTCGACCGAGACCCGTCCTCTCATTCATCGGTAACCTTCACGTCCCCCCCATCAACCTCGAACCACCTCAGCTTCGCCGTGCCCATCATCAAACAAGATCCAACCATGGATTACTGGTCCAATATCCTTGGCTACCACCAGAACCCTCCATCTCTCAAGAACCCTTCCAACACTGTTACTCTCGCTTCTCTGCAAAATTACAACAATAACAACACAATGGTACCGTTCAGCTTGGAGTTGCAGAGAAATAGCAATGCATTAATGGATGGGGGTGTGATTAATGCTCAGAACATTGAGCAGCAACAAAGCGGAAGCAATAATAATAATAGTAGTACCGGAACGGTGGATTCAAGTTTAAGTTCAGTGATAGCATTGGGCACTCCGATAGGTTTAAATAGTAACAGTAGTTATGAGAGTTCATCTGGATATGGAAACTGGAGTGTAGGGCCTGGTCTGCGCACATTCCAAACACATGCAAAAGGAAGTCTGTTTCAGACGCCAATATTTGGAATGGAATGA 1536 0.4922 MDSYPNWLAFSLSNHSPLFHSFSSGTTDDASPQAAVGGPATSNDLSIFAGGSRKFEDFLGGSSASSVADATAPPPQFSADNVFSSDLKTIAAGFLPRLAAAEQAEPRKQALAVTVPSPRKTADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEERAARAYDLAALKYWGPTTTTNFQISNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLSAVTNFDMSRYDVKSIANSSLPIGGLSSKAENSSDSSASDSKSNDGSLRSADSNNVDRDPSSHSSVTFTSPPSTSNHLSFAVPIIKQDPTMDYWSNILGYHQNPPSLKNPSNTVTLASLQNYNNNNTMVPFSLELQRNSNALMDGGVINAQNIEQQQSGSNNNNSSTGTVDSSLSSVIALGTPIGLNSNSSYESSSGYGNWSVGPGLRTFQTHAKGSLFQTPIFGME 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1443 511 CDD AP2 232 293 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 Gene3D AP2/ERF domain 233 293 IPR036955 GO:0003700|GO:0006355
Prci4g1443 511 Gene3D AP2/ERF domain 131 199 IPR036955 GO:0003700|GO:0006355
Prci4g1443 511 ProSiteProfiles AP2/ERF domain profile. 233 291 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 FunFam AP2-like ethylene-responsive transcription factor ANT 130 199 - -
Prci4g1443 511 SUPERFAMILY DNA-binding domain 232 293 IPR016177 GO:0003677
Prci4g1443 511 PRINTS Ethylene responsive element binding protein signature 132 143 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 PRINTS Ethylene responsive element binding protein signature 273 293 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 85 386 - -
Prci4g1443 511 MobiDBLite consensus disorder prediction 308 359 - -
Prci4g1443 511 ProSiteProfiles AP2/ERF domain profile. 131 197 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 SMART rav1_2 131 203 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 SMART rav1_2 233 297 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 CDD AP2 130 199 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 Pfam AP2 domain 131 189 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 Pfam AP2 domain 233 283 IPR001471 GO:0003700|GO:0006355
Prci4g1443 511 SUPERFAMILY DNA-binding domain 130 199 IPR016177 GO:0003677
Prci4g1443 511 FunFam AP2-like ethylene-responsive transcription factor 232 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1443 Prci-Chr4 11834049 11837626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1443 59 511 AP2-EREBP Transcription Factor Family AT5G57390 53.319 5.05e-148 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Prci4g1443 AP2 6.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1443 K09285 - gmx:100803558 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1443 4 11834049 11837626 Prci4g1443 4 11834049 11837626 ECH