Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1441 ATGGACTATATTCGGAGCAACAGCTTCAAGCGTCTCTTCTCCTTCAAACGACGCAGTTTCAGTGAACAAGTTTTGATCCCTGAAAGCACACAAACACCTGAAAGAGAAAAACCCGCTTGGAAATGCTTCTCTTTTCAGCAACTATTTGATGCCACCAATGGCTTCTGCTCTGTGAATCGTGTTGGGAAAGGAGGGTTTGCAGAGGTTTATAAGGGAACGTTAGAAGATGGAGAGGTAATCGCAGTGAAGAGGCTCACAAAAATCTGTAATGATGAGAGGAAAGAGAGAGAGTTTTTGACAGAGATTGGAACAATTGGTCATGTTCGTCATTCAAACGTTTTACCTCTTCTGGGTTGCTGTATTGATAATGGGCTTTACCTCGTCTTTGAGTTTTCCACTAGAGGCTCTGTTTCTTCTCTTCTTCATGATGAGAATGAGCCTGTCGTGGAATGGAAAACAAGACATAAGATTGCTCTTGGGACTGCACGTGGCCTTCATTATTTGCACAAGGGTTGCCAGAGAAGGATAATTCATAGGGATATAAAGGCCTCCAATGTTCTTCTGACTTCAGATTTTGAACCACAGATATCTGATTTTGGACTGGCCAAATGGCTTCCTTCTCAGTGGACTCATCATTCCATTGCCCCAATTGAAGGAACATTTGGGCACTTGGCTCCTGAGTACTACATGCATGGAATTGTGGATGAGAAAACTGATGTGTTTGCATTTGGGGTGTTTCTGCTAGAACTCATCTCTGGGAAGATACCTGTGGATGGATCAAACCAGAGTTTACACAACTGGGCTAGGCCAATATTGAAGAGAGGGGAGCTAGAAAAGGTGGTGGATCCAAGGCTTGAAGGAGCTTATGATGTTTCAGAGCTAACAAGGCTTGCTTTTGCAGCCTCTCTGTGTATCCGACCATCTTCTACTTGGAGACCTACCATGACTCAGGTATTAGAGGTAATGGAGGAGGAAGAAATAGATGAAGATAAATGGAAAATGCCAGAAGAAGATGAAGAAGATGGCGCATGGGGTCTTGAGGATTTGGAATGTGATTATGATAGTTCATGCTCAGTTATATCTCTTCCTGACTCAATTACAAGTAATTAA 1110 0.4288 MDYIRSNSFKRLFSFKRRSFSEQVLIPESTQTPEREKPAWKCFSFQQLFDATNGFCSVNRVGKGGFAEVYKGTLEDGEVIAVKRLTKICNDERKEREFLTEIGTIGHVRHSNVLPLLGCCIDNGLYLVFEFSTRGSVSSLLHDENEPVVEWKTRHKIALGTARGLHYLHKGCQRRIIHRDIKASNVLLTSDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYMHGIVDEKTDVFAFGVFLLELISGKIPVDGSNQSLHNWARPILKRGELEKVVDPRLEGAYDVSELTRLAFAASLCIRPSSTWRPTMTQVLEVMEEEEIDEDKWKMPEEDEEDGAWGLEDLECDYDSSCSVISLPDSITSN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1441 369 SUPERFAMILY Protein kinase-like (PK-like) 34 323 IPR011009 -
Prci4g1441 369 Gene3D Phosphorylase Kinase; domain 1 17 131 - -
Prci4g1441 369 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
Prci4g1441 369 Pfam Protein kinase domain 58 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1441 369 FunFam Putative receptor-like serine/threonine-protein kinase 23 131 - -
Prci4g1441 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Prci4g1441 369 ProSiteProfiles Protein kinase domain profile. 55 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1441 369 MobiDBLite consensus disorder prediction 326 345 - -
Prci4g1441 369 Gene3D Transferase(Phosphotransferase) domain 1 133 343 - -
Prci4g1441 369 FunFam Putative receptor-like serine/threonine-protein kinase 133 345 - -
Prci4g1441 369 CDD STKc_IRAK 61 319 - -
Prci4g1441 369 PANTHER OS08G0249100 PROTEIN 28 339 IPR046958 -
Prci4g1441 369 SMART serkin_6 55 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1441 Prci-Chr4 11771961 11776494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1441 43 325 Trihelix Transcription Factor Family AT1G70460 43.493 2.33e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci4g1441 Pkinase 6.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1441 - - ahf:112697971 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1441 4 11771961 11776494 Prci9g0952 9 24199380 24203518 CCT