Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1433 ATGGCTAAAGGTTTGAAGAAAAGCAACTTCGAAGTGCTGGGAATGTGTTGTAATTCAGAGGTAGCTCTGATTGAAAAGATTCTGAAGGGTCTCCTTGGAGTGAAGGACATCTCAATAATGTTCCCAACTCGAACAGTCACTGTAATCCATGATCTTGATCTAATTTCTGAGTCACAAATCACTGATGCACTGAACATGGCGAGGCTTGAAGCTAGTTTGAGACCAGAAGGAAAGACTAAGCATGAAAAGAAATCACCAGCACCAAGTACTTTGGCTTGTGGCTTGTTACTTGCACTTTCTTTTTTGAAGTGTGCTTATCAACCTTTGGAATACTTGGCTATCGGTGCTGTTCTTATTGGCTCACCTAGAGTTCTGTTAAGAGGCATAGCTTCCATCAGGAATCTTTCACTTGATATCAACATTCTGGTCCTATTAGCAGTGTTTGGTACTCTTGCTTTGGGAGATTTCTGGGAAGCAGCAATCATCACCTTCCTATTCTCAATAGCTCAATGGTTAGAGACAGTAGCAAGTTACAAGGCTATGGCCGCCATGTCCTATTTGACAAACATGACTCCTCAAAGGGCCATTATAGCTGAGACTGGGGAACACGTTGATGTCAATGAAGTTATAATCAACACTGTCCTTGCAGTCAAGGCTGGTGATTCTATTCCTCTTGATGGTATTGTTGTTGAAGGAAAATGTGAAGCCGACGAGAAAATGTTGACTGGAGAGTCATTCCCTGTCAGCAAAGAGCTGGGTTCGACTGTTTGGGCAGGCACTATTAATCTAAATGGTTATATCAGTGTGCGAACAACTGCATTGGCAAAAGATACAGCAGTGGCAAGAATGACAAAGCTTGTTGAGGAAGCCCATGCCAGAAAATCCAGAGCTCAAAGATTCATAGATACCTGTGCAAAGTACTATGTACCAGGGGTTTTCTTGATATCAGTTGGCGTTGCTGTGATTCCCCTGGCGTTAAGGGTTCCCAACATTAAGTATTGGTGTCACATGGCTATTGTGGTTTTAGTAAGTGCATGCCCTTGTGCTCTTATCCTCTCCACACCTGTTACAATCTTCTGTGCCCTCACAAAAGCTGCCACAAGCGGTTTACTTCTTAAAGGTGGAGATTATGTAGAAGCACTTGCTGGGATTAAGATTCTGGCTTTTGATAAAACGGGCACATTAACAAAAGGGGAGTTCACTGTCACAGATTTTTCTGCCGTTGGAGATGATATTAGCATTCAACTGTTATTGTACTGGGTTTCTAGCATTGAGAGTAAATCAAGTCACCCTATGGCAGCTGCACTTTTGGAATATGGAAGGTTACATCGTATCAAACCAATCCCTGAAAATGTGGAAGAGTTTCAGAATTTTCCAGGGGAAGGAGTTTATGGTAAAATCGATGGGGAAGATGTCTATATTGGCAACAGGAAAATATGTGAGAGAGCTGGCTGTGAAAGTGAGTTCCTAAGCAAAGAACAAAGAAATGGTTATATATGCTGCGGAACAACTCTAGTTGGAGTGTTCAGCCTATCAGATACATGCAGAACTGGAGCTTTAGAGGCAATAGAAAAGCTAAAGTCTTTAGGCGTGAAATCAGCAATGCTGACAGGAGATGGCACTCATGCTGCTACGCTTGTTCAGACTCAGCTGAATCATGCTCTAGACATGGTTCATGCAGAGCTTCTACCACATGAAAAGGCAGCGATCATAGAGAATTTCAAGAAAGAAGGGCTGACAGCCATGATTGGAGACGGTATAAACGACGCTCCAGCATTAGCCACAGCTGATGTGGGCATCTCAATGGGAATCTCAGGTTCAGCTCTCGCAGTAGAGACTGGGCACGCAATTCTCATGTCAAACGACATCAGGAAGATACCTGAAGCCATTGATCTAGCAAGAAGGACATTCAGAAAGCTAGTTCAGAATGCCGTTTTCTCCATCGTCACAAAGGGTTTGATCCTAGCTTTGGCACTAGCAGGATACCCACTGGTTTGGCTCGCCGTTTTGACTGATGTTGGGACCTGCTTGCTTGTGATTCTCAATAGCATGTTACTCCTGAACGAGAAAAAACACAATAACAAGATAAAACCCAACAAACCCAAATACGGGTTGTTCGTAACGGACAAGAACGAGCCATTACTTGAAAAGCAAACTGATTGCAGTGAGGGATGCTACAGCAATGTCTCTCGTAAAGTTTGTTGTTCTGATTATGGGCCCTCGAATCTGAGCCTGCTCGAGGAAGGTCATTGTGGGAAATTGGTCTCCGAAGATATTGGGATGTTAGAGACCTGCAATGATGGTGATGGCTGTTGCAGTGAAGTCAGGTTTGAGGAGGAGTCTTCATGCAGAACACAAAGCGGCTCTAACTGTTGCCAGATGAAGTACACAGAAGCGAAGTGTGGTTCTGGGAAATGTGGAAGTCGTCAATGCTGCGAACAATCCAGGAAGACATGCTGCGTCGATCGAGTTTACATACCAGAAATTGTGATTGAGTGA 2499 0.437 MAKGLKKSNFEVLGMCCNSEVALIEKILKGLLGVKDISIMFPTRTVTVIHDLDLISESQITDALNMARLEASLRPEGKTKHEKKSPAPSTLACGLLLALSFLKCAYQPLEYLAIGAVLIGSPRVLLRGIASIRNLSLDINILVLLAVFGTLALGDFWEAAIITFLFSIAQWLETVASYKAMAAMSYLTNMTPQRAIIAETGEHVDVNEVIINTVLAVKAGDSIPLDGIVVEGKCEADEKMLTGESFPVSKELGSTVWAGTINLNGYISVRTTALAKDTAVARMTKLVEEAHARKSRAQRFIDTCAKYYVPGVFLISVGVAVIPLALRVPNIKYWCHMAIVVLVSACPCALILSTPVTIFCALTKAATSGLLLKGGDYVEALAGIKILAFDKTGTLTKGEFTVTDFSAVGDDISIQLLLYWVSSIESKSSHPMAAALLEYGRLHRIKPIPENVEEFQNFPGEGVYGKIDGEDVYIGNRKICERAGCESEFLSKEQRNGYICCGTTLVGVFSLSDTCRTGALEAIEKLKSLGVKSAMLTGDGTHAATLVQTQLNHALDMVHAELLPHEKAAIIENFKKEGLTAMIGDGINDAPALATADVGISMGISGSALAVETGHAILMSNDIRKIPEAIDLARRTFRKLVQNAVFSIVTKGLILALALAGYPLVWLAVLTDVGTCLLVILNSMLLLNEKKHNNKIKPNKPKYGLFVTDKNEPLLEKQTDCSEGCYSNVSRKVCCSDYGPSNLSLLEEGHCGKLVSEDIGMLETCNDGDGCCSEVRFEEESSCRTQSGSNCCQMKYTEAKCGSGKCGSRQCCEQSRKTCCVDRVYIPEIVIE 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1433 832 CDD P-type_ATPase_HM 89 685 - -
Prci4g1433 832 FunFam Copper-transporting ATPase 1, putative 177 291 - -
Prci4g1433 832 Gene3D - 379 634 IPR023214 -
Prci4g1433 832 NCBIfam HAD-IC family P-type ATPase 162 663 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1433 832 Gene3D - 399 515 IPR023299 GO:0000166
Prci4g1433 832 NCBIfam heavy metal translocating P-type ATPase 139 686 IPR027256 GO:0006812|GO:0016020|GO:0019829
Prci4g1433 832 Pfam haloacid dehalogenase-like hydrolase 384 597 - -
Prci4g1433 832 Gene3D - 176 291 - -
Prci4g1433 832 ProSiteProfiles Heavy-metal-associated domain profile. 6 72 IPR006121 GO:0046872
Prci4g1433 832 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 706 IPR023298 -
Prci4g1433 832 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Prci4g1433 832 PRINTS P-type cation-transporting ATPase superfamily signature 529 539 - -
Prci4g1433 832 PRINTS P-type cation-transporting ATPase superfamily signature 583 602 - -
Prci4g1433 832 PRINTS P-type cation-transporting ATPase superfamily signature 507 518 - -
Prci4g1433 832 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Prci4g1433 832 CDD HMA 10 72 IPR006121 GO:0046872
Prci4g1433 832 SUPERFAMILY HAD-like 387 684 IPR036412 -
Prci4g1433 832 Pfam E1-E2 ATPase 198 366 - -
Prci4g1433 832 NCBIfam cadmium family heavy metal-translocating P-type ATPase 139 687 - -
Prci4g1433 832 SUPERFAMILY HMA, heavy metal-associated domain 4 76 IPR036163 GO:0046872
Prci4g1433 832 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Prci4g1433 832 ProSitePatterns Hypothetical cof family signature 2. 583 605 - -
Prci4g1433 832 Gene3D - 2 74 - -
Prci4g1433 832 FunFam Putative cadmium/zinc-transporting ATPase 3 2 75 - -
Prci4g1433 832 SFLD p-type atpase 371 636 IPR044492 -
Prci4g1433 832 SFLD C1.7: P-type atpase like 371 636 - -
Prci4g1433 832 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 690 - -
Prci4g1433 832 FunFam Putative cadmium/zinc-transporting ATPase 3 399 515 - -
Prci4g1433 832 SUPERFAMILY Calcium ATPase, transduction domain A 201 287 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1433 Prci-Chr4 11704816 11715223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1433 2 823 Primary Pumps ATPases AT4G30110 52.859 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1433 K01534 - gmx:100815324 1032.71