Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1424 ATGGAGGGTTCAGCAGCTAAACGCAGACGCGTTTACTCTCTGGAGCCAAACAAAATAGTGGAAGCTGTGTTCGCGAGGAAGTACCTGAGCTATCTAGTTCCAGCCTTGACGAAGATGAAGGAAAACACAGACTACAATAAGGAAGAACACAGTGATTCGTTGAAGAAGGGTGTGAAGTTCGAAGTGGACATGGCAATGGTGCTGTCAGCTCAGGGTTCTGCTTGGAGCAACGCCTTAAAACTCAGCCTCCTCCGAGAACATAACCAATACGTCATCAATGGAGGAGCACTGTCTTCTTCTTCTTCTTCATCATCTTCATCAACCGCAAGGAAACTGATGGCGAACTGCGAGTACGACCAGAATCTGACGGCGGTGACGGCGGAGGAAAACGAGAAGGAGGTGATGAGGAGGCTGAGAAGGTTGGTACCAGGAGGAGAAGAGATAAGCAGTGACCAGGAAATGCTTGCGGAGCTCAAAAGTTATGTCAGGTGTCTGCAAATGCAGGTCAATATTCTGCAATGTCTGGCCCAGGCTCATTCATTTTAG 546 0.4853 MEGSAAKRRRVYSLEPNKIVEAVFARKYLSYLVPALTKMKENTDYNKEEHSDSLKKGVKFEVDMAMVLSAQGSAWSNALKLSLLREHNQYVINGGALSSSSSSSSSSTARKLMANCEYDQNLTAVTAEENEKEVMRRLRRLVPGGEEISSDQEMLAELKSYVRCLQMQVNILQCLAQAHSF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1424 181 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 178 IPR044660 GO:0006355
Prci4g1424 181 CDD bHLH_AtIBH1_like 128 176 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1424 Prci-Chr4 11576389 11577134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1424 7 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 36.257 1.42e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1424 - - pcin:129307732 342.043