Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1416 ATGCTAGTCGCAGTAACATTCGAAGGAAGCTACACTGTGAGGCCTTCTAATCCAACGTGGATCGGAACAATGGCCTTATCCGAATGGGATCAAATAGGTTGCCTGACTCACGTTCCCGCCATCTACTTCTATCGATCCCCACAAAGTACTACTTCCACCATTGCTGACACCTTGAAAGACTCATTGAGCAGAGTGATGGTGTCGTTTTATCCCTTGGCTGGTCGTTTACAGTGGATAGGCAATGGTCGTCTTCAGCTTCAGTGCAATGCAATGGGGGCTCGATTCATTGTAGCTAAGTGCGAATCGAATTTAAACGACATCGGCGACTTGTCGCTCTGCTCTCAACACCGTAACCTTTTCCCTTCTGCAGATTATAGCCTTCCAATTCATGAGATTCCTCTGTTTCTGGTTCAGCTCACCACGTTTCGATGCGGTGGCTTCAGCATCGGCATTGCACTTTCTCACACTGTTGCAGATGGACCAGCGGCCCTTCACTTCATGTCTGAGTGGGCTAGGGTTACAAGAGGAGAGACTCTACAAACACCACCATTTCTGGACCGAAGCGTCTTCCGAGCAGGGCAGCCACCGTTGGCGGGGTCACCGCCGCCAATCCTCAACGATTACCCGGAGTATGGGAGTCCAGCATTACTACTTGGTCAGTCAGATACTTTAGAGGAAAGAAAGGAGAAAACCACAACAGCTATGCTAAGGATAACGAAAGACCAAGTTGAGAAATTGAGGAAGATGGCAAATGAAAGTTGGGAAAAGCCCAAGGTGCGAGGATTCACTCGTTACGAGACGATATGTGGATATGTATGGACAATCTCGTGCAAGGCAAGAGGACACAGGAAAGAGCAACCAACGGCAATAGGTATTTGTGTTGATTCGAGGAGTCGCATGAAGCCGGAACTACCAAGAGAGTACTTTGGGACTGCGACTTTTGATGTGATAGCTCAGAGTGTGGCTGGTGATCTCATGTCAAAACCATTAGGGTTTGCTGCGAGTAAAGTAAGGGAAGCGATAGAGAAGGTGACAGACAAGTACATAAGGTCATTGATCGAGTTCTTGAAGAACCAAAAAGAGTTGACAGAGTTCCAAGACATTCATACAGTACTGAGGAAAGAGGAAGGACCATTTTATGGAAACCCTAATATTACGGTGGTGAGTTGGTTGACATTGCCTCTATATGGGTTTGATTTTGGGTGGGGAAAGGAAGATTATATGGGGCCAGGACCTTATGAAGAAGATGGGACTTCTTTGCTTATGCACAGTCCTGAAGGAGATGGTTCTGTTGTGGTTGCTATGTGCCTCCAAGAAGCTCATATGAATGAGTTTAAGAAGCTCTTTTATCAAGACATGGTGTGA 1365 0.4674 MLVAVTFEGSYTVRPSNPTWIGTMALSEWDQIGCLTHVPAIYFYRSPQSTTSTIADTLKDSLSRVMVSFYPLAGRLQWIGNGRLQLQCNAMGARFIVAKCESNLNDIGDLSLCSQHRNLFPSADYSLPIHEIPLFLVQLTTFRCGGFSIGIALSHTVADGPAALHFMSEWARVTRGETLQTPPFLDRSVFRAGQPPLAGSPPPILNDYPEYGSPALLLGQSDTLEERKEKTTTAMLRITKDQVEKLRKMANESWEKPKVRGFTRYETICGYVWTISCKARGHRKEQPTAIGICVDSRSRMKPELPREYFGTATFDVIAQSVAGDLMSKPLGFAASKVREAIEKVTDKYIRSLIEFLKNQKELTEFQDIHTVLRKEEGPFYGNPNITVVSWLTLPLYGFDFGWGKEDYMGPGPYEEDGTSLLMHSPEGDGSVVVAMCLQEAHMNEFKKLFYQDMV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1416 454 Gene3D - 3 201 IPR023213 -
Prci4g1416 454 Gene3D - 220 452 IPR023213 -
Prci4g1416 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 450 - -
Prci4g1416 454 FunFam Tryptamine hydroxycinnamoyl transferase 219 450 - -
Prci4g1416 454 Pfam Transferase family 4 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1416 Prci-Chr4 11427814 11429522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1416 3 451 Monolignol Biosynthesis Gene Families AT5G48930 35.556 2.69e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1416 K13065 - gmx:100777007 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1416 4 11427814 11429522 Prci4g1416 4 11427814 11429522 ECH