Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1414 ATGACGGAGCAGGAAAGGAAGAAGGAAGGAGCGAGAAAGATGAAGAAGAGCTACTTCGATGTCGTAGGATTGTGCTGTTCCTCGGAGGTTCCGCTGATTGAGAACATCCTCAAACCTCTGGAAGGAATCAAAGAGGTTTCCGTCATCGTCCCTTCCCGAACCGTCATTGTCGTCCACGACACTCTGCTCATTTCACAGTTCCAAATCGCTAAGGCGTTAAACCAAGCAAGGCTGGAGGCGAATGTGAGGGTCTATGGAGAGGAGGAAGAGAAGCAGAAGCACATGTGGCCAAGTCCATACGCGATGACGTCAGGAATATTGCTGGTGATATCACTATTCAAGTACGTGTATGGCCCACTCCAATACGTGGCCTTAGCAGCTGTTGCCGCTGCTCTTCTTCCCATTCTCCTCAAAGCCTTCGCCTCCCTCCGCCACCTCCGTCTCGACATTAACATCCTCATCCTCGTCGCAGTTGTGGGAACTATTGTCATGCATGATTATTTGGAAGCTGCTACCATTGTCTTCCTCTTCTCCATTGCTGAATGGCTTGAATCAAGAGCAAGTCACAAGGCGAGTGCAGCAATGTCATCGTTGATGAACATAGCTCCCCAGAAAGCAACCATAGCCGAAACCGGAGAGGTTGTGGACGCCGACGAGGTCAAAGTGAACACCGTACTAGCCGTTAAAGCAGGGGAAGTCATACCAATTGATGGAATTGTTGTAGATGGAACTTGTGAAGTCGACGAGAAAACTTTGACCGGCGAGTCATTCCCTGTACTGAAACAAAAGGACTCCACTGTTTGGGCAGGCACTATCAATTTAAATGGTACTCTTTCTTGTTAAACTAATGCCCTGGCTGAAGATTGTGTGGTGGCGAAAATGGCAAAGCTAGTGGAAGAAGCTCAAAACAGTAAAACCAGGAGCCAGAGATTGATAGACAAGTTTGCCAAGTTTTATACCCCAGCTGTTGTGATCATATCAACTCTATTGGCGGTGATTCCAGTTTTGTTTAGAGTACATAATGTGAAACATTGGGTTCATTTTGCGCTTGTGGTTCTAGTAAGCGCATGCCCATGTGCTCTTGTCCTTTCTACGCCGGTTGTGACTTTCTGTGCGTATACAAAAGCAGCGACATCGGGCCTTCTCATCAAAGGGGGTGATTACCTGGAAACCCTTGCAAAAGTTAAGGTCATGGCGTTTGACAAAACTGGCACCATTACAAAGGGTGAATTTGTGGTGACAAATTTCCAATCCCTCTGTGATGATGTGGATTTGAACACGTTGCTTTACTGGGTCTCAAGCATAGAAAGTAAGTCAAGTCATCCATTGGCGGCAGCAATTATTGATTATGGAAAGTCACTTTCTATTGATCCTAAGCCAGAAGAGGTGACAGACTATGAATTTCCTGGAGAAGGTATTTGTGGAAAAATTGATGAGAGATATATTTACATTGGAAGTAGAAAAATTGCCACAAGAGCTGGGTCTAAGACAGTTCCTGCCTTTGAAGGCTCTCAGGGAGGAAAGACTATTGGCTATGTATACTCAGGAGCAACTCCAATTGCAGTTTTCTCTCTTTCAGATGTTTGCCGAGCTGGGGTAGTGGAGGCTCTAAGTCAGCTAAAGTTATTGGGCATCAAAAGTTCCATGCTTACTGGAGATAGTCATGCATCTGCCATGCAGGCTCAAGAGCAGCTAGGGCATGCTTTGGAGCAAGTCCACGCAGAGCTTTTACCAGAAGGAAAAGCCAAAATCATCACTGAATTCAAAAAGGAAGGACCAACAGCCATGGTTGGAGATGGTGTGAATGATGCACCAGCATTAGCTGCAGCTGACATTGGTATCTCAATGGGTATTTCAGGTTCTGCACTAGCAAGCGAAACAGGAAATATAATTCTCATGTCAAATGACATGAGGAAGATACCACAAGCCATTAAGCTTGCAAGAAAGTCTCGAAGGAAAGTAATAGAAAATATAATACTGTCAATTGTGACTAAGGCTGCAATCATTGGCCTCGCCATTGCTGGTCATCCACTTGTTTGGGCAGCAGTTCTTGCCGACGTTGGAACATGCTTGTTGGTAATCTTAAACAGCATGCTCCTCCTGCACCGAAGAGAGAAGCATAGAGGAAAATGTTGTAGATCTTCCACTCAGCTACATCTCCATAAAAGTGGATGTCATGCCAATAATGGCAAATCTTCACACCACCACCACCACCACAAGCATGATACTCATCAACATTCTAGAATTATAGAAAACCATGACCAAAGTAAGTCCAGTGATGAATTCCGTGAACCAAATGTCTGTCATCATGGAAGATGTGAGAAAGGTAGTGTCCAGTCGCATGATACAGAAAGCAAGGGTTGTCAGGATCTCAGGACAAGATTGTGA 2388 0.4523 MTEQERKKEGARKMKKSYFDVVGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDTLLISQFQIAKALNQARLEANVRVYGEEEEKQKHMWPSPYAMTSGILLVISLFKYVYGPLQYVALAAVAAALLPILLKAFASLRHLRLDINILILVAVVGTIVMHDYLEAATIVFLFSIAEWLESRASHKASAAMSSLMNIAPQKATIAETGEVVDADEVKVNTVLAVKAGEVIPIDGIVVDGTCEVDEKTLTGESFPVLKQKDSTVWAGTINLNGTLSCXTNALAEDCVVAKMAKLVEEAQNSKTRSQRLIDKFAKFYTPAVVIISTLLAVIPVLFRVHNVKHWVHFALVVLVSACPCALVLSTPVVTFCAYTKAATSGLLIKGGDYLETLAKVKVMAFDKTGTITKGEFVVTNFQSLCDDVDLNTLLYWVSSIESKSSHPLAAAIIDYGKSLSIDPKPEEVTDYEXFPGEGICGKIDERYIYIGSRKIATRAGSKTVPAFEGXSQGGKTIGYVYSGATPIAVFSLSDVCRAGVVEALSQLKLLGIKSSMLTGDSHASAMQAQEQLGHALEQVHAELLPEGKAKIITEFKKEGPTAMVGDGVNDAPALAAADIGISMGISGSALASETGNIILMSNDMRKIPQAIKLARKSRRKVIENIILSIVTKAAIIGLAIAGHPLVWAAVLADVGTCLLVILNSMLLLHRREKHRGKCCRSSTQLHLHKSGCHANNGKSSHHHHHHKHDTHQHSRIIENHDQSKSSDEFREPNVCHHGRCEKGSVQSHDTESKGCQDLRTRL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1414 797 Pfam haloacid dehalogenase-like hydrolase 395 613 - -
Prci4g1414 797 SUPERFAMILY HAD-like 398 700 IPR036412 -
Prci4g1414 797 ProSiteProfiles Heavy-metal-associated domain profile. 15 81 IPR006121 GO:0046872
Prci4g1414 797 Pfam E1-E2 ATPase 205 377 - -
Prci4g1414 797 CDD P-type_ATPase_HM 104 701 - -
Prci4g1414 797 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Prci4g1414 797 NCBIfam cadmium family heavy metal-translocating P-type ATPase 150 489 - -
Prci4g1414 797 NCBIfam HAD-IC family P-type ATPase 173 676 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1414 797 SFLD p-type atpase 382 651 IPR044492 -
Prci4g1414 797 SUPERFAMILY HMA, heavy metal-associated domain 13 81 IPR036163 GO:0046872
Prci4g1414 797 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 12 705 - -
Prci4g1414 797 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 393 IPR023298 -
Prci4g1414 797 NCBIfam heavy metal translocating P-type ATPase 150 702 IPR027256 GO:0006812|GO:0016020|GO:0019829
Prci4g1414 797 MobiDBLite consensus disorder prediction 747 767 - -
Prci4g1414 797 Gene3D - 187 302 - -
Prci4g1414 797 MobiDBLite consensus disorder prediction 724 767 - -
Prci4g1414 797 SFLD Haloacid Dehalogenase 382 651 - -
Prci4g1414 797 PRINTS H+-transporting ATPase (proton pump) signature 599 615 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1414 797 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1414 797 Gene3D - 410 531 IPR023299 GO:0000166
Prci4g1414 797 Gene3D - 390 650 IPR023214 -
Prci4g1414 797 MobiDBLite consensus disorder prediction 730 746 - -
Prci4g1414 797 SUPERFAMILY Calcium ATPase, transduction domain A 213 298 IPR008250 -
Prci4g1414 797 Gene3D - 11 84 - -
Prci4g1414 797 FunFam Copper-transporting ATPase 1, putative 188 302 - -
Prci4g1414 797 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Prci4g1414 797 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Prci4g1414 797 PRINTS P-type cation-transporting ATPase superfamily signature 545 555 - -
Prci4g1414 797 PRINTS P-type cation-transporting ATPase superfamily signature 248 262 - -
Prci4g1414 797 PRINTS P-type cation-transporting ATPase superfamily signature 399 413 - -
Prci4g1414 797 FunFam Putative cadmium/zinc-transporting ATPase 3 11 84 - -
Prci4g1414 797 FunFam Putative cadmium/zinc-transporting ATPase 3 410 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1414 Prci-Chr4 11367016 11376857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1414 11 718 Primary Pumps ATPases AT4G30110 69.676 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1414 K01534 - gmx:100817567 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1414 4 11367016 11376857 Prci4g1414 4 11367016 11376857 ECH