Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1359 ATGGAAGATGACGTTGGAGCATGCAACACGGGGCTGTGTCTTGGACTGGGGATAGGAGGGTATGTGCCAAAGAAGAAGAAGCAGATCAGAGAGAGCAATAATCAAGTGCCCTTTGAACTTTATCCCGACGGAGAAACTATGGATCGTCATGAAGATCTTGGATTGTTCAGAATAAAGAGAATGGATCATGATACCTCCACCAACTGCAGAAAGAAACTGAGGCTCACCAAGGATCAATCTGCCTTGCTTGAAGAAAGCTTCAAGCTCCATGCCACTCTTAACCCTGCTCAGAAACAATCCCTCGCAGAGCAATTGAAGTTGAGACCCAGACAGGTCGAAGTTTGGTTCCAGAACAGAAGAGCAAGGACCAAGTTGAAGAAGACGGAGATAGACTGCGAGTTCTTGAGGAAATGCTGTGAGAATCTCAGAGACGAGAACCGAAGGTTGAAGAAAGAGTTGCAGGAGTTACGTCCACAGAAAATCGGGACGTCGCCGATGTTCATTCAACTCTCAAAGACGGCGGCGGCGACGACGACGACGACTTGTTCGTCATGTCAGAAACCATTCAAAGCGAATGACGCAAATAATAATGATAATAAGAACAACAACAATAAAAAGAACAAACTGGAGAGAGATTGCTGTTAG 645 0.4574 MEDDVGACNTGLCLGLGIGGYVPKKKKQIRESNNQVPFELYPDGETMDRHEDLGLFRIKRMDHDTSTNCRKKLRLTKDQSALLEESFKLHATLNPAQKQSLAEQLKLRPRQVEVWFQNRRARTKLKKTEIDCEFLRKCCENLRDENRRLKKELQELRPQKIGTSPMFIQLSKTAAATTTTTCSSCQKPFKANDANNNDNKNNNNKKNKLERDCC 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1359 214 CDD homeodomain 70 127 IPR001356 GO:0003677
Prci4g1359 214 SMART HOX_1 68 130 IPR001356 GO:0003677
Prci4g1359 214 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Prci4g1359 214 SMART halz 126 169 IPR003106 GO:0006355|GO:0043565
Prci4g1359 214 Gene3D - 63 131 - -
Prci4g1359 214 MobiDBLite consensus disorder prediction 190 214 - -
Prci4g1359 214 Coils Coil 192 212 - -
Prci4g1359 214 Coils Coil 125 159 - -
Prci4g1359 214 SUPERFAMILY Homeodomain-like 67 135 IPR009057 -
Prci4g1359 214 Pfam Homeobox associated leucine zipper 126 157 IPR003106 GO:0006355|GO:0043565
Prci4g1359 214 ProSitePatterns 'Homeobox' domain signature. 101 124 IPR017970 GO:0000981|GO:0006355
Prci4g1359 214 Pfam Homeodomain 70 124 IPR001356 GO:0003677
Prci4g1359 214 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 58 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1359 Prci-Chr4 10990655 10991924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1359 62 187 Homeobox Transcription Factor Family AT4G37790 64.844 1.34e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci4g1359 Homeodomain 6.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1359 K09338 - pcin:129307836 405.216