Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1357 ATGGCAATTGCAGCTTCAACCTCATCGTCCACCATGAAGATCACCCATAGCCACGACAGCCACAATATTAACTACGACAAGAGGAGGCCGCCGCCGCCGGCAGAGGTTGACGACGACGATGTCGACGACGGTCACCAGCATGACGTGGTCATGCCTGGGTTTCGCTTCCACCCAACAGAAGAAGAACTGGTCGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAGCCTTTCACTGTTGAACTCATCACTTTTCTCGATCTTTATCGCTATGACCCATGGGAGCTTCCTGGTTTGGCGGCGATTGGGGAGAAGGAATGGTACTTCTATGTGCCGAGGGATCGGAAGTATCGGAACGGTGATCGGCCGAACCGTGTGACGACGTCGGGGTATTGGAAAGCTACCGGAGCTGATAGAATGATCAAAACAGATGGGCTCAGATCCATCGGACTGAAGAAAACCCTAGTCTTTTATACTGGCAAAGCTCCTAAAGGGATCCGTACCAGTTGGATTATGAACGAGTATCGCTTGCCACACCACGATACTGAACGATTTCAAAAGGTTGAGATATCTCTTTGTCGAGTGTACAAGAGAGCAGGTGTGGACGACCATCCGTCTCTCCCTCGTTATCTCGCGACATCATCAAGAGCTTCGCATAATTCGCACAAGGACAAGCACAACGTCAACCATTTAATGGTTCATCAGAACATCAGATTCCTGGGACAACAATCCCATCATGATCACCAATATCAAACGGACCAGGTTGTGGATAAGATGAATCATCAAACTGATCGGGAAAACACTACTATTGATGGCACCAAGTACAACAATCTGGATCAGGGCGGAGGGTTAATGCTCATCCAGCAACCAAAGCAAGCACAAGTTCATCATCATCTTCACCAACCTCCAGAAGCAGCAGCATCCTCCTTCTTCCCCGAAGGCTCCAGTACTTCTAATTCTTCCTCGTTACCATCTAGTGAAAATATTAGCAATGCAATAATGGTGGATGATCATCATCTCCATCGGCTAGCGAGTTATAATCATCAACATCTGTTACAGTACTGCAATAACATTTATTCTGCTGCTGATCCTCCTCCTTCTCAGAGTACTCAGCAATATCACCCTAACATGCAGTTCTCTAATCTTCTGTTGCAGCCACAACAGTCAATAATGGCTCTTAATTCTCTTCCAAACTCTTTCTCTGACAGATTGTGGGAGTGGAATCAAATCCCTGAGGCAACAAACCGAGACTTCACCAACATGTCCTTCAAGTAA 1272 0.4725 MAIAASTSSSTMKITHSHDSHNINYDKRRPPPPAEVDDDDVDDGHQHDVVMPGFRFHPTEEELVEFYLRRKVEGKPFTVELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGLRSIGLKKTLVFYTGKAPKGIRTSWIMNEYRLPHHDTERFQKVEISLCRVYKRAGVDDHPSLPRYLATSSRASHNSHKDKHNVNHLMVHQNIRFLGQQSHHDHQYQTDQVVDKMNHQTDRENTTIDGTKYNNLDQGGGLMLIQQPKQAQVHHHLHQPPEAAASSFFPEGSSTSNSSSLPSSENISNAIMVDDHHLHRLASYNHQHLLQYCNNIYSAADPPPSQSTQQYHPNMQFSNLLLQPQQSIMALNSLPNSFSDRLWEWNQIPEATNRDFTNMSFK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1357 423 MobiDBLite consensus disorder prediction 305 325 - -
Prci4g1357 423 Pfam No apical meristem (NAM) protein 52 176 IPR003441 GO:0003677|GO:0006355
Prci4g1357 423 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 48 299 - -
Prci4g1357 423 MobiDBLite consensus disorder prediction 19 35 - -
Prci4g1357 423 ProSiteProfiles NAC domain profile. 50 197 IPR003441 GO:0003677|GO:0006355
Prci4g1357 423 MobiDBLite consensus disorder prediction 1 43 - -
Prci4g1357 423 MobiDBLite consensus disorder prediction 309 325 - -
Prci4g1357 423 MobiDBLite consensus disorder prediction 1 18 - -
Prci4g1357 423 Gene3D NAC domain 59 200 IPR036093 GO:0003677|GO:0006355
Prci4g1357 423 SUPERFAMILY NAC domain 49 196 IPR036093 GO:0003677|GO:0006355
Prci4g1357 423 FunFam NAC domain-containing protein 35 59 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1357 Prci-Chr4 10965084 10967732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1357 1 212 NAC Transcription Factor Family AT2G02450 73.239 4.57e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g1357 NAM 1.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1357 - - pcin:129309516 824.313