Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1355 ATGGGAAACTGTCTAGCTCGTCAATCAGATTCTCCAAATTCTCGTAGCAACTCCAACAATGGCGCCAACAACAACCAATTAGGGAGCTGCCAATTATCGATCAGACACAATAATTCGAGACTCTTGCAGAGTACAAGCAGTTCCACTCTGCTTGGACGAAGCAGCATCTCTGCTGGAAATAGCAGGCTATTTGGACCAAGTAGCAGTAACACATACACAACCAGCAATACGAATACATCTCTTTTAGGCTCTGATATCAGCCAAACGTTTAAAGTAAGAGGTGAAGAGGAGTTTCCTAATGGGCAGATCTTGGATGTGGCAAACTTGATAGATTTCACTTTTGAGGAACTGAAGGCAGCAACTAGAAATTTCAGACCCGACTCTGTACTAGGAGAGGGAGGCTTTGGCAGGGTGTACAAGGGTTGGCTTAAAGATAGAGCATCATCAAGTAATAACAGATATGAGGGATTGGTTGTTGCCGTCAAGAGATTGAATTCCGATAGCACACAAGGAATTACGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCACCCCAACCTTGTAAAGTTGTATGGATATGGAAGGGAAAATGGAGAGCTATTTCTGGTGTATGAATACATGCACCGAGGCAGCTTGGCTAACCATATATTCGGAAGTAAGAGCTTATCACATTACTTAATTGCTGGACAACTTTCAAGCATGTTTTTTGATTTTGTTTGTGCAGGAGGATCAAATGTACGGCCACTGCCATGGGACACAAGGTTAAAGATTATGATTGGAGCAGCTAGGGGCCTAAATTTCTTGCACTCGTTAGAGAATAGAATCATATACAGAGATTTTAAGCCATCCAATATCTTACTTGACAAGAGCTACATAGCCAAGTTAGCAGACTTCGGTTTGGCCAAAACTGTTCCTTCTGGCGGCAGGACTCATGTGACGACAAGGGTGATGGGAACTTACGGTTATGCAGCCCCTGAGTCACCTGACTATGAAAAGCGACGTGTATGGATTTGGGATTGTTTTGGTGGAGATATTGACAGGCAAAGCGATATCTGA 1065 0.4338 MGNCLARQSDSPNSRSNSNNGANNNQLGSCQLSIRHNNSRLLQSTSSSTLLGRSSISAGNSRLFGPSSSNTYTTSNTNTSLLGSDISQTFKVRGEEEFPNGQILDVANLIDFTFEELKAATRNFRPDSVLGEGGFGRVYKGWLKDRASSSNNRYEGLVVAVKRLNSDSTQGITEWQSEVNFLGRLSHPNLVKLYGYGRENGELFLVYEYMHRGSLANHIFGSKSLSHYLIAGQLSSMFFDFVCAGGSNVRPLPWDTRLKIMIGAARGLNFLHSLENRIIYRDFKPSNILLDKSYIAKLADFGLAKTVPSGGRTHVTTRVMGTYGYAAPESPDYEKRRVWIWDCFGGDIDRQSDI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1355 354 SUPERFAMILY Protein kinase-like (PK-like) 105 330 IPR011009 -
Prci4g1355 354 MobiDBLite consensus disorder prediction 1 28 - -
Prci4g1355 354 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Prci4g1355 354 Gene3D Transferase(Phosphotransferase) domain 1 211 354 - -
Prci4g1355 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Prci4g1355 354 PANTHER OS01G0588500 PROTEIN-RELATED 49 330 - -
Prci4g1355 354 Gene3D Phosphorylase Kinase; domain 1 109 209 - -
Prci4g1355 354 FunFam Serine/threonine-protein kinase BIK1 92 209 - -
Prci4g1355 354 FunFam Os07g0541700 protein 232 322 - -
Prci4g1355 354 Pfam Protein kinase domain 127 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1355 354 ProSiteProfiles Protein kinase domain profile. 124 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1355 Prci-Chr4 10936401 10938859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1355 112 329 Glycoside Hydrolase AT3G07070 46.575 1.22e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci4g1355 Pkinase 2.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1355 - - pcin:129308416 603.594