Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1354 ATGGGAAACTGTCTAGCTCGTCAATCAGATTCTCCAAATTCTCGTAGCAACTCCAACAATGGCGCCAACAACAACCAATTAGGGAGCTGCCAATTATCGATCAGACACAATAATTCGAGACTCTTGCAGAGTACAAGCAGTTCCACTCTGCTTGGACGAAGCAGCATCTCTGCTGGAAATAGCAGGCTATTTGGACCAAGTAGCAGTAACACATACACAACCAGCAATACGAATACATCTCTTTTAGGCTCTGATATCAGCCAAACGTTTAAAGTAAGAGGTGAAGAGGAGTTTCCTAATGGGCAGATCTTGGATGTGGCAAACTTGATAGATTTCACTTTTGAGGAACTGAAGGCAGCAACTAGAAATTTCAGACCCGACTCTGTACTAGGAGAGGGAGGCTTTGGCAGGGTGTACAAGGGTTGGCTTAAAGATAGAGCATCATCAAGTAATAACAGATATGAGGGATTGGTTGTTGCCGTCAAGAGATTGAATTCCGATAGCACACAAGGAATTACGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCACCCCAACCTTGTAAAGTTGTATGGATATGGAAGGGAAAATGGAGAGCTATTTCTGGTGTATGAATACATGCACCGAGGCAGCTTGGCTAACCATATATTCGGAAGTAAGAGCTTATCACATTACTTAATTGCTGGACAACTTTCAAGCATGTTTTTTGATTTTGTTTGTGCAGGAGGATCAAATGTACGGCCACTGCCATGGGACACAAGGTTAAAGATTATGATTGGAGCAGCTAGGGGCCTAAATTTCTTGCACTCGTTAGAGAATAGAATCATATACAGAGATTTTAAGCCATCCAATATCTTACTTGACAAGAGCTACATAGCCAAGTTAGCAGACTTCGGTTTGGCCAAAACTGTTCCTTCTGGCGGCAGGACTCATGTGACGACAAGGGTGATGGGAACTTACGGTTATGCAGCCCCTGAGTACGTGGTCACAGGTCACCTGACTATGAAAAGCGACGTGTATGGATTTGGGATTGTTTTGGTGGAGATATTGACAGGCAAAGCGATATCTGATATACTTAAGCATATGGGTAAGGACCAATCATTAGTTGATTGGATCAAGGCAAATCTATTGAGTAGATGGAAGATGAGGGAGACGATGGACAGAAGATTGGAGGGGAAATATCCACCCAAGTTAGCATTACAAGTAGCTCAACTTGCTCTAAAATGTGTGGGAACGGAGTATAAACTCAGGCCACCAATGAAAGAAGTTGTCGAGGCATTAGAACAGGTTGAGGCAGCAAATGATAAAACTACTGACATCAGAAAACGTGCCATTCATTCTGGAGCAGCTCAACTTCATGGTCGCCCAGATGGAGGTTAA 1389 0.4334 MGNCLARQSDSPNSRSNSNNGANNNQLGSCQLSIRHNNSRLLQSTSSSTLLGRSSISAGNSRLFGPSSSNTYTTSNTNTSLLGSDISQTFKVRGEEEFPNGQILDVANLIDFTFEELKAATRNFRPDSVLGEGGFGRVYKGWLKDRASSSNNRYEGLVVAVKRLNSDSTQGITEWQSEVNFLGRLSHPNLVKLYGYGRENGELFLVYEYMHRGSLANHIFGSKSLSHYLIAGQLSSMFFDFVCAGGSNVRPLPWDTRLKIMIGAARGLNFLHSLENRIIYRDFKPSNILLDKSYIAKLADFGLAKTVPSGGRTHVTTRVMGTYGYAAPEYVVTGHLTMKSDVYGFGIVLVEILTGKAISDILKHMGKDQSLVDWIKANLLSRWKMRETMDRRLEGKYPPKLALQVAQLALKCVGTEYKLRPPMKEVVEALEQVEAANDKTTDIRKRAIHSGAAQLHGRPDGG 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1354 462 ProSiteProfiles Protein kinase domain profile. 124 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1354 462 MobiDBLite consensus disorder prediction 1 28 - -
Prci4g1354 462 Gene3D Phosphorylase Kinase; domain 1 109 209 - -
Prci4g1354 462 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Prci4g1354 462 FunFam Serine/threonine-protein kinase BIK1 92 209 - -
Prci4g1354 462 Pfam Protein tyrosine and serine/threonine kinase 128 430 IPR001245 GO:0004672|GO:0006468
Prci4g1354 462 FunFam PTI1-like tyrosine-protein kinase 3 230 443 - -
Prci4g1354 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Prci4g1354 462 SUPERFAMILY Protein kinase-like (PK-like) 105 430 IPR011009 -
Prci4g1354 462 PANTHER OS01G0588500 PROTEIN-RELATED 49 434 - -
Prci4g1354 462 Gene3D Transferase(Phosphotransferase) domain 1 223 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1354 Prci-Chr4 10935349 10938850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1354 112 434 Receptor kinase-like Gene Family AT4G02010 44.785 1.30e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci4g1354 PK_Tyr_Ser-Thr 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1354 - - pcin:129308416 847.81